Gene Information

Name : Tbis_1621 (Tbis_1621)
Accession : YP_003652228.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1876698 - 1877498 bp
Length : 801 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_3149 ABC transporter related

DNA sequence : 
ATGGCGCGCCTGACCGGAACCGGCCTCACGCTCGGGTACGGCGAGCGGCAAGTCGCCACCGACCTGAACGTGGTCATTCC
CGACGGCTCGTTCACCGTGATCATCGGCCCCAACGCCTGCGGCAAGTCCACCCTGCTGCGCGCGCTCGCCCGGATGCTCA
AGCCCACCGCCGGGGCCGTGCACCTCGACGGCAAGGTGATCACCACGATGCCCACCAAGGAGGTGGCGCGGCGGCTCGGC
CTGCTCCCGCAGACCTCCATCGTCCCCGAGGGGATCACGGTCGCCGACCTCGTCGCCCGCGGCCGCTACCCGCACCAGCG
GCTCATGCGGCAGTGGTCGCCCGCGGACGAGGCGGCCGTGGCCGAGGCCATGCGCGCCACCGACATCACGGAGCTGGCCG
ACCGGATCGTCGACGAGCTCTCCGGCGGCCAGCGGCAGCGGGTGTGGCTCGCCATGGTGCTCGCCCAGCAGACCCCGATC
CTGCTGCTCGACGAGCCCACCACCTTCCTCGACATCGCCCACCAGTTCGACATCCTCGACCTGTGCGCCGAGCTGCACGA
GTCCGGGCGGACCCTGGTGGCCGTGCTGCACGACCTCAACCAGGCGTGCCGGTACGCCACCCACCTCATCGTCATGCGCG
CCGGGAGGATCGTGGCGGAGGGCGACCCGAACCGGATCATCACCCCGGCGCTCATCGAGGAGGTCTTCGGCCTGCGCTGC
GAGGTCATCCCCGACCCGCAGACCGGGACGCCGATGATCGTGCCCGAGGCGCGGCGCCGGGTGCCGGCCGCCTCCGTCTG
A

Protein sequence : 
MARLTGTGLTLGYGERQVATDLNVVIPDGSFTVIIGPNACGKSTLLRALARMLKPTAGAVHLDGKVITTMPTKEVARRLG
LLPQTSIVPEGITVADLVARGRYPHQRLMRQWSPADEAAVAEAMRATDITELADRIVDELSGGQRQRVWLAMVLAQQTPI
LLLDEPTTFLDIAHQFDILDLCAELHESGRTLVAVLHDLNQACRYATHLIVMRAGRIVAEGDPNRIITPALIEEVFGLRC
EVIPDPQTGTPMIVPEARRRVPAASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-61 58
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-61 58
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-61 58
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-61 58
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-58 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 51
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-52 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-50 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-50 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-50 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-50 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-57 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-57 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_1621 YP_003652228.1 ABC transporter-like protein BAC0164 Protein 7e-52 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_1621 YP_003652228.1 ABC transporter-like protein VFG0925 Protein 4e-71 61
Tbis_1621 YP_003652228.1 ABC transporter-like protein VFG1042 Protein 6e-52 51