Gene Information

Name : Tbis_1602 (Tbis_1602)
Accession : YP_003652209.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1851706 - 1853349 bp
Length : 1644 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bcj:BCAS0451 ABC transporter ATP-binding protein

DNA sequence :
ATGACCGAGCTCGCCGTCACCCGCGTCACCGGCAGCACCGCCCACAACCCGCTGGTGGCCGTCGAGGACCTGCGCGTCTC
CTTCCCCCGCGCCGGGGTCGAGGCCGTGCGCGGGGTCTCGCTCACCATCGCCCCCGGGGAGTGCGTCGCCCTGGTCGGGG
AGTCGGGCTCCGGCAAGAGCGTCACGGCCCGCTCGCTGCTCGGCCTGGCCGGGCCGGGGGCCGTGGTCCGGGCGGCCAGG
TTCGAGATCGGCGGCCGCGACGCCCGCGCGTTCACCGCCCGCGACTGGCGGCGGCTGCGCGGCCGGTTCGCCGGGCTGGT
GCTGCAGGACGCGCTCGTCTCCCTCGACCCGCTGCGCACGGTCGGCGCGGAGATCGCCGAGGTGCTCGCCACCCACCGCG
TCGTCCCGCGGGCGGAGCGCGCCGCCCGGATCCGCCGGCTGCTCGGCGAGGTGGGCGTGCCCGAGCCCGGGCTGCGGATG
CGGCAGTACCCGCACCAGCTCTCCGGCGGGCTGCGGCAGCGCGCGCTGATCGCGTCGGCGATCGCCGGGGAGCCCGACCT
GATCATCGCCGACGAGCCCACCACCGCGCTCGACGTGACCGTGCAGGCGCAGATCCTCCGGCTGCTCGCCGCGCGGAAGG
CGGCGGGGACCGCGCTGCTGGTGATCAGCCACGACCTCGCCGCGGTCGCCTCGATCGCCGACCGGATCCTGGTGATGCGG
GACGGGACGATCGTCGAGGAGGGGACCGCCGCCCGGGTGCTGTCCGCGCCCGGGCACCCGTACACCCGCGCCCTGCTCGC
CGCCGTGCCCTCCGGGGTGTCCCGCGGCACCCGCCTCACCGCCCCCGGGCACCCGCTCCCGCCCAGGTCGCCCGACCGGT
CGGCACCGGTGCTGACCGCGTCCGGCCTCTCCTTCGCGTACGGCTCGCGCACCGCGGTGGACGGGGTGTCGTTCACCCTG
CACCGGGGGGAGACCCTCGGCATCGTCGGCGAGTCCGGGTCGGGGAAGACGACGCTCGCCCGGCTCGTCCTCGGCCTGCT
CACCCCGCGCGCGGGCGAGGTGCGGCTGCACGGCCGCCCGTGGAGCGGCGTCCCCGAGCGCGAGCGGCGCCCCCGGCGGC
GGGCCATCCAGCTCATCGCGCAGAACCCGCTGGAGTCGTTCGACCCCCGCCACACCGTGGCCCGGCTGCTCGCCGACCCG
CTCGCCCGGCTGCCGCGCGCCGAGCGCCGGGCCCGCGTGCTGGAGCTCGCCGACATGGTCGCCCTGCCCCGGGACGTGCT
CGACCGGCGGCCGCGCGAGCTGTCCGGGGGCGAGCGCCAGCGGGTCGCGATCGCCCGCGCGCTCGCCGGCGACCCCGACG
TGCTCGTCTGCGACGAGCCCGTCTCCGCGCTGGACGTGTCGATCCAGGCCCAGGTGCTCGACCTGCTCGCCGAGCTTCAG
GCGGCCCGCGGCACCGCCCTGCTGTTCATCTCCCACGACCTGGGCGTGGTCCACCACCTCAGCGACCGCGTGCTCGTCAT
GAGGGACGGCCGGGTCGTGGAGGAGGCCGACGCCGATGAGATCTTCTTCCGCCCGCGCCACCCGTACACCCGGGAGCTGC
TCGCCGCGGTGCCGCGGCTCGGCGCCGCGGTGGGGCAGGGGTGA

Protein sequence :
MTELAVTRVTGSTAHNPLVAVEDLRVSFPRAGVEAVRGVSLTIAPGECVALVGESGSGKSVTARSLLGLAGPGAVVRAAR
FEIGGRDARAFTARDWRRLRGRFAGLVLQDALVSLDPLRTVGAEIAEVLATHRVVPRAERAARIRRLLGEVGVPEPGLRM
RQYPHQLSGGLRQRALIASAIAGEPDLIIADEPTTALDVTVQAQILRLLAARKAAGTALLVISHDLAAVASIADRILVMR
DGTIVEEGTAARVLSAPGHPYTRALLAAVPSGVSRGTRLTAPGHPLPPRSPDRSAPVLTASGLSFAYGSRTAVDGVSFTL
HRGETLGIVGESGSGKTTLARLVLGLLTPRAGEVRLHGRPWSGVPERERRPRRRAIQLIAQNPLESFDPRHTVARLLADP
LARLPRAERRARVLELADMVALPRDVLDRRPRELSGGERQRVAIARALAGDPDVLVCDEPVSALDVSIQAQVLDLLAELQ
AARGTALLFISHDLGVVHHLSDRVLVMRDGRVVEEADADEIFFRPRHPYTRELLAAVPRLGAAVGQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-90 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-74 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-74 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-74 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 8e-74 42