Gene Information

Name : Tbis_1538 (Tbis_1538)
Accession : YP_003652146.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1748844 - 1750499 bp
Length : 1656 bp
Strand : -
Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bcy:Bcer98_1330 SSS family solute/sodium (Na+) symporter

DNA sequence :
GTGAGCCAGGCGTTAGCCATCATCCTGTTCATCCTCTTTGTCGCGGTAACGCTGCTCATCACCGTTTGGGCGAGCCGGCA
AACCAAGGACGCGGGTGACTTCTACGCCGGCGGGCGCTCGTTCTCCGGGATGCAGAACGGTCTGGCGATCAGTGGCGACT
ACCTGTCGGGCGCCTCATTTCTCGGCATCGCGGGCGTGATCGCCCTATACGGCTATGACGGCTTCCTCTATTCGATCGGC
TTCCTGGTGGCCTGGCTGCTGGCGTTGCTGCTCGTGGCCGAGCTGTTCCGCAACTCCGGCAAGTACACCATGGCCGACGT
GGTGGCCTTCCGGATGAGCGCGCGTTCGGTCCGCATCGCCGCCGGGGTCTCCACCATCACCGTGTCGATCGTCTACCTGC
TCGCGCAGATGGTCGGCGCCGGTGCGCTCGTGTCCATGCTGCTCGGCCTGGACGGCCCGGTCGCCAACGCCGCCATCATC
GTCCTGGTCGGCATGCTGATGATCATCTACGTGGCGGGCGGCGGCATGAAGAGCACGACCTGGGTGCAGATCATCAAGGC
CGTCCTGCTGATGGTCAGCGCCACGATCGTGACGGTCCTGGTGGCCGCCAAGTTCGGCTTCAACATCTCCGAGCTGCTCC
GGCAGGCCGCCGACCAGAGCGGGCAGGGTGAGGCGTTCCTCGAGCCCGGGCTGCGGTACGCGACCGAGGCGGAGGGCCTG
GCGGGCAAGCTCGACCTCATCAGCCTCGGCCTGGCGCTGGTCCTGGGCACGGCCGGCCTCCCGCATGTGCTGATGCGCTT
CTACACCGTGCCGACCGCGAAGGAGACCCGCAAATCCGTGCTCGTGTCCATCGGCCTCATCGGCACCTTCTACCTGTGCA
CCCTGATCCTGGGCTTCGGCGCGGCCGCCGTGGTCGGCAGCGAGGAGATCGCCAAGGCGAATCCCGGGGGCAACACGGCG
GTCGCTCAGCTCGCGGAACGGCTCGGCGAGATGCTCTTCGGCGAGATCGGGGCGGCCGTCCTGCTGGCCGTCGTCTCCTC
CGTGGCCTTCGCCACCATCCTCGCCGTGGTCGCCGGGCTCACCCTCGCCTCCTCCTCGTCCGTCGCGCACGACCTGTACG
CGCACGCGGGCAAGCGCGGCCGGATCAACGAGGCGGATGAAGTACGCTTCGCCCGGATCGCCGCGTTCGTCATCGGCGGG
GTGTCGATCGTGCTCGGCATCTTCGCGCAGCGGCTCAACGTGGCGTTCCTGGTCTCCCTGGCGTTCGCGATGGCCGCCTC
CGCCAACCTTCCCGCGATCCTTTACAGCCTGTTCTGGGAACGTTTCAACGCCGCGGGCGCGATCGCCGCGATCTACGGCG
GGCTCGGCTCGTCTGTCCTCCTGGTGTTCTTCTCGCCGGTGGTCTCCGGATCTCCGGGCTCGCTCTTCCCCGATGTCGAC
TTCCACTGGTTCCCGCTCAGCAATCCGGGCCTGATCTCCATCCCGTTCGGCTTCTTCTGCGGCTGGCTCGGCACGATCCT
CAATAGGGAGTACGACCCGCGGAAGTTCGCCGAGATGGAGGTACGGTCGCTCACCGGCGTGGGAGCGGTGCGCGGGGAGC
AGTGGTTCGAGGCCCGGCGCACCCGGCCGGTACGGCGTGCCGGCCTCCCCTACTGA

Protein sequence :
MSQALAIILFILFVAVTLLITVWASRQTKDAGDFYAGGRSFSGMQNGLAISGDYLSGASFLGIAGVIALYGYDGFLYSIG
FLVAWLLALLLVAELFRNSGKYTMADVVAFRMSARSVRIAAGVSTITVSIVYLLAQMVGAGALVSMLLGLDGPVANAAII
VLVGMLMIIYVAGGGMKSTTWVQIIKAVLLMVSATIVTVLVAAKFGFNISELLRQAADQSGQGEAFLEPGLRYATEAEGL
AGKLDLISLGLALVLGTAGLPHVLMRFYTVPTAKETRKSVLVSIGLIGTFYLCTLILGFGAAAVVGSEEIAKANPGGNTA
VAQLAERLGEMLFGEIGAAVLLAVVSSVAFATILAVVAGLTLASSSSVAHDLYAHAGKRGRINEADEVRFARIAAFVIGG
VSIVLGIFAQRLNVAFLVSLAFAMAASANLPAILYSLFWERFNAAGAIAAIYGGLGSSVLLVFFSPVVSGSPGSLFPDVD
FHWFPLSNPGLISIPFGFFCGWLGTILNREYDPRKFAEMEVRSLTGVGAVRGEQWFEARRTRPVRRAGLPY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 4e-93 56
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-62 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_1538 YP_003652146.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 8e-72 46
Tbis_1538 YP_003652146.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 4e-72 45