Gene Information

Name : Tbis_1371 (Tbis_1371)
Accession : YP_003651982.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1552087 - 1553175 bp
Length : 1089 bp
Strand : +
Note : KEGG: xca:xccb100_3664 riboflavin biosynthesis protein RibD (diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-[5-phosphoribosylamino]uracil reductase); TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase do

DNA sequence :
GTGACCTCGCGGGACGACCACTACATGCGGCGGGCGATCGAGCTCGCCGCCCGCGGCCACGGCGGCACCAGTCCCAATCC
GGTCGTCGGCTGCGTGGTCGTCGACCCCACCGGTGAGATCGTCGGAGAGGGCTTTCACGCGTACGCCGGTGGGCCGCACG
CCGAGATCGTCGCACTGCGCCAGGCGGGTGAGCGCGCCCGCGGCGCCACCGCCTACGTGACCCTCGAACCCTGCGACCAC
ACCGGGAGAACCGGCCCGTGCACCGCCGCGCTCCTGCAGGCGGGCGTCGCGCGGGTGGTGGTCGCCGTCCCCGATCCCAA
CCCGGTCGCCGCCGGCGGGGCGGAGACGCTCCTGCGGCACGGGGTGACGGTGGACGTGGGGGTGCTCGCGGCGGAGGCCG
AGCGGGTGAACGAGGAGTGGCTCACCTACATGCGCGCCCGCCGGCCCTTCGTGACCTGGAAGTTCGCCGCCACCATCGAC
GGGCGCTCCGCGGCGGCCGACGGCACCAGCAAGTGGATCACCTCGCCGGAGGCCCGCGCCGACGTGCACCGGCTCCGGGC
CGCGAGCGACGCCATCGTCGCCGGGATCGGCACCGTGCTCGCCGATGATCCGCGGCTCACCGTGCGCACCCCCGAACCCC
GGCGGACGCGGCCGGTGCTGCGCGTCGTGGTCGACTCCGGCGCCCGGACCCCGGCGGGGGCCCGGGTGCTCGACGGCGAG
GCCCCCACGCTCGTGGCCGTCGCCGACGACGCCGACCCGCCCCCGCACCTCGGCGACGCCGTACGGCTCCCGCGGGCGGA
CGGCGGGCTCGACCTGCGCGCGCTCCTCGCCGAGCTGCACCGCAGGCAGGTCGTGAGCGTGCTGCTCGAGGGCGGCCCGA
CCCTCGCCGGGTCCTTCCTGCGGGAGGGCCTGGTCGACCGGGTCGTCGGCTACCTCGCGCCCGCGCTGCTCGGCGCCGGC
TCCGCCGCGCTCGGGCCGGCCGGGGTCACCACCATCGCCGAACGCCACCGGCTCGAGTTCGAGGAGGTCACCCGGATCGG
GCCGGACCTCAAGGTCGTCCTCCGGCCGTCCCGTAAGGAGGGGAACTGA

Protein sequence :
MTSRDDHYMRRAIELAARGHGGTSPNPVVGCVVVDPTGEIVGEGFHAYAGGPHAEIVALRQAGERARGATAYVTLEPCDH
TGRTGPCTAALLQAGVARVVVAVPDPNPVAAGGAETLLRHGVTVDVGVLAAEAERVNEEWLTYMRARRPFVTWKFAATID
GRSAAADGTSKWITSPEARADVHRLRAASDAIVAGIGTVLADDPRLTVRTPEPRRTRPVLRVVVDSGARTPAGARVLDGE
APTLVAVADDADPPPHLGDAVRLPRADGGLDLRALLAELHRRQVVSVLLEGGPTLAGSFLREGLVDRVVGYLAPALLGAG
SAALGPAGVTTIAERHRLEFEEVTRIGPDLKVVLRPSRKEGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-42 42
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-42 42