Gene Information

Name : Tpau_0461 (Tpau_0461)
Accession : YP_003645441.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : class I and II aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 486567 - 487823 bp
Length : 1257 bp
Strand : -
Note : PFAM: aminotransferase class I and II; KEGG: rer:RER_13320 alanine aminotransferase

DNA sequence :
ATGAGCCGACCGCATGTGCCCCACATCCGCACCGAACTCAAGCCGCTCGAGCAGTCCGCCAAGCTGCAGAACGTGCTGTA
CGAGATCCGTGGACCCGTGGTGGCACAGGCGGCTCGGCTCGAGGCGCAGGGGCACCGCATCCTCAAGCTGAACATCGGCA
ACCCGGCGACCTTCGGCTTCGAAGCGCCCGACTCGATCGTCCGCGACATGATCCACGCGCTGCCCACCTCGCAGGGCTAC
AGCGAGTCGCAGGGCATCGCCTCCGCGCGGCGGGCCGTGGTGACCCGCTACGAGGAGGTCCCCGACTTCCCCTACTTCGA
CATCGGCGACGTCTACCTCGGTAACGGGGTCTCCGAGCTCATCACCATGACGCTGCAGGCGCTGCTCAACAACGGCGACG
AGGTGCTCATCCCCGCGCCCGACTACCCCCTGTGGACCGCCATGACGTCGCTCTCCGGCGGCACCCCCGTGCACTACCTC
TGCGACGAGGACAACGGCTGGAACCCGTCGGTCGAGGATATCGAGGCGAAGATCACTCCGCGCACCAAGGCGATCGTGGT
GATCAACCCGAATAACCCGACGGGCGCGGTGTACTCGCGCGAGACGCTGCAGCAGATCGTCGAGGTGGCGCGCAAGCACT
CGCTGCTCGTGCTCGCCGACGAGATCTACGACCGCATCCTCTACGACGACGCGCAGCACATCTCCATCGCCGAACTCGCG
CCCGACCTGCTGGTCTGCACGTTCAACGGCCTGTCCAAGGCGTACCGCGTGTGCGGCTACCGCGCCGGCTGGATGGTGCT
CACCGGGCCCAAGGACCACGCCTCCGGCTTCATCGAGGGCCTGACCCTCCTGGCGTCGACCCGCCTGTGCCCCAACGTCC
CCGCGCAGCACGCGATCCAGGTGGCGCTCGGCGGTTACCAGTCGATCAACGACCTGATCCTCCCCGGCGGACGGCTGCTG
GAGCAGCGCGACGTCGCGTTCGAGAAGTTGAACGCCATCGACGGGGTGAGCTGCGTCAAGCCCCAGGGCGCGCTGTACGC
CTTCCCGAAGCTGGACCCGAACGTGCACGAGATCCGCGACGATGAGCAGCTGGTGCTCGATCTGCTCAACCAGGAGAAGA
TCCTGCTGGTCCAGGGCACCGGTTTCAATTGGCCCACGCCCGACCATCTGCGCGTGGTGACCCTCCCCTGGGCCCGTGAC
CTGTCCGAGGCGCTCGACCGCTTCGGCAACTTCCTGAGTTCTTATAAGCAGAAGTAG

Protein sequence :
MSRPHVPHIRTELKPLEQSAKLQNVLYEIRGPVVAQAARLEAQGHRILKLNIGNPATFGFEAPDSIVRDMIHALPTSQGY
SESQGIASARRAVVTRYEEVPDFPYFDIGDVYLGNGVSELITMTLQALLNNGDEVLIPAPDYPLWTAMTSLSGGTPVHYL
CDEDNGWNPSVEDIEAKITPRTKAIVVINPNNPTGAVYSRETLQQIVEVARKHSLLVLADEIYDRILYDDAQHISIAELA
PDLLVCTFNGLSKAYRVCGYRAGWMVLTGPKDHASGFIEGLTLLASTRLCPNVPAQHAIQVALGGYQSINDLILPGGRLL
EQRDVAFEKLNAIDGVSCVKPQGALYAFPKLDPNVHEIRDDEQLVLDLLNQEKILLVQGTGFNWPTPDHLRVVTLPWARD
LSEALDRFGNFLSSYKQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-147 75
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-147 75
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-147 75
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-147 75