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Name : Tpau_4123 (Tpau_4123) Accession : YP_003649031.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Virulence Product : periplasmic binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0614 EC number : - Position : 4248427 - 4249467 bp Length : 1041 bp Strand : + Note : PFAM: periplasmic binding protein; KEGG: cdi:DIP1062 iron-siderophore uptake system exported solute-binding component DNA sequence : GTGGCGTACGCTACCCCGGTGATGCATAGAACTCTCGCCCGCCGACTCGCGCCCGCAGTCGTCCTCCTGGCCGCCGCCGT CGGTGTGACCGCCTGCTCGAACTCGTCCGACTCCCAGGGCTCCGGCAACACCGACGTGGCCGCCGGCGGTGAGCGTTTCG GCACCGCCGACGCCGAGACCGCCAAACTCGGCACCGATGCCAAACCCGGGGTCTTCCCGCGCACCGTCCGACACGCAGCG GGCGTCACCGAGATTCCGAAGAAGCCGGAGCGCATCGTCGTGCTCGACACCGGCGAGTTGGATTCCGTTCTCAGCCTGGG GCTCAAGCCCGTCGGCATGGTCGAGACCGAAGGTAGTAGTTCGGTGCCGACGTACCTCGCCGACAAGGTGCAGGGCGTCG AGCGGGTCGGCAAGATCCAGAACGTGAACGTCGAGGCGATCGCCAGACTCAAGCCCGACCTGATCCTGGGAAGCAAACTG CGTGTGGACAAGCTGTACCCGCAGCTCTCCGCGATCGCGCCGACCGTCTTCTCGATCCGGCCCGGATTCCCGTGGAAGGA GAACTTCCGCCTGATCGGAGCCGCTACGGGCGAGGAGACGAAGACCGTCGAGCAGTTGAACCGGTACGCCGACAATGCAC GAGCCCTGTCCGCACGATTCACCGGCACCAAACCCACCATCTCCCTGCTGCGATTCATGCCCGGGAAGATGCGCGTGTAC GCCGACAAGTCGCTGATCGGTGTGATCCTTCAGGACGCCGGCCTACCCCGCCCGGCCGGACAGAACGTGGACGAGCTGGC CGTCGAGATCTCGATGGAGAACCTCTCGAAGGCCGACGGCGATTACCTGTTCTACTCCAGTTACGGCAAGCCCGAGAACA CCGGTGAAACCGCGGCGATCACTGGCCCCGCGTGGTCACAGCTGGGCGCGGTGCAGCGAGGCAAGGCCTTCCGAGTGGAC GACGATGTGTGGTACCTGGGCCTCGGTCCCACCGGCGCCAGCCTCATCGTGCAGCAGCTGGGCGAGTTCCTGGCGAAGTA A Protein sequence : MAYATPVMHRTLARRLAPAVVLLAAAVGVTACSNSSDSQGSGNTDVAAGGERFGTADAETAKLGTDAKPGVFPRTVRHAA GVTEIPKKPERIVVLDTGELDSVLSLGLKPVGMVETEGSSSVPTYLADKVQGVERVGKIQNVNVEAIARLKPDLILGSKL RVDKLYPQLSAIAPTVFSIRPGFPWKENFRLIGAATGEETKTVEQLNRYADNARALSARFTGTKPTISLLRFMPGKMRVY ADKSLIGVILQDAGLPRPAGQNVDELAVEISMENLSKADGDYLFYSSYGKPENTGETAAITGPAWSQLGAVQRGKAFRVD DDVWYLGLGPTGASLIVQQLGEFLAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagD | YP_003782433.1 | iron-siderophore binding protein | Virulence | PiCp 1 | Protein | 1e-94 | 62 |
| fagD | YP_005680310.1 | Iron siderophore binding protein | Not tested | PiCp 1 | Protein | 9e-95 | 62 |
| fagD | YP_005682400.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 9e-95 | 62 |
| fagD | YP_005684491.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 9e-95 | 62 |
