Gene Information

Name : Tpau_3924 (Tpau_3924)
Accession : YP_003648835.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3004
EC number : -
Position : 4047283 - 4048491 bp
Length : 1209 bp
Strand : +
Note : KEGG: rha:RHA1_ro04329 Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger

DNA sequence :
ATGAGCGACGCATCGTCTTCCTCGCAGACGAACGCGCTATCGCGGTTCCTGCGCACCGAGACCGTGGGCGGAACCGCCCT
GCTGATGGCGGCCTTCGTCGCACTCGTCTGGGCGAACTCCCCCTGGGCCGACGCATACCAGCATCTCGGCGAGATCCATG
TGGGCACAGACTCACTGAGCCTGTTCGGACAGCCTCTGCACCTGCGTCTGACGCTCGCCGAGTGGGCCAAGGACGGCCTG
CTCGCGATCTTCTTCTTCGTCGCGGGGCTCGAACTCAAACGCGAACTCGTGGTGGGCGAGCTCTCGACGCTCCGCAGCGC
GGCCCTGCCGGTGATCTGCGCGACCGGCGGTGTCGTGGTCCCGGCGCTGATCGCCTTCGCCGTCGCCCACGACGATCCGC
GGATCGCGAGCGCCTGGGCCATCCCGATCGCCACCGACATCGCGTTCGCGCTGGGCATTCTCTCGCTCACCGGATCCCGG
CTTCCCTCAGGCGCCCGCGTCTTCCTGCTGGGCCTGGCGGTGGTCGACGATCTGATCGCGATCGTGGTGATCGCGGTGCT
GTTCTCCACCGGATTGAGCCTGCTGTGGCTGGGCGTCGCCGTGGCCGGCTGCGCCGCCTACGCGCTGGCACAGCACCGCC
GGATCACCACCCCGCTGCTGTACATCCCGCTCGCGGCACTGGTGTGGATCGCCATGTTGCAGTCCGGGGTTCACGCCACC
ATCGCCGGTGTAGCGCTCGGCCTGCTCACCCGGGTCCGGCGCGACAAGGGCGAACTCGAGGCACCCGCGGAGCGGCTCGA
ACACCGCATCCAGCCCTTCTCCGCGCTGGTGTGCGTGCCGATCTTCGCGTTCTTCGCCTCCGGTGTCGCGATCAACGGCG
AAGTCTTCCGGGCACTGTTCACCGACAAGATCGCCCTCGCGATCATCGCCGGGCTGTTCTTCGGCAAGATCATCGGCATC
TTCGGCTCCAGCACGCTCGCCGTGAAACTCCGCATAGCCGAACGACCGGAGGGCCTGTTCCCGCGCGACATCCTCGCGCT
CAGCGTGCTCGGTGCCATCGGGTTCACGGTCAGCCTGCTGGTCGCCGAACTGTCCCTCGGCGACGGGGCGGATCTCGCCA
AGGCAGCCGTGCTCCTGACGTCGCTCGTCGCCTCGGTCATCGGATCACTGCTACTGCTACGGCGTGGTCGCGCACACACG
AACACCTGA

Protein sequence :
MSDASSSSQTNALSRFLRTETVGGTALLMAAFVALVWANSPWADAYQHLGEIHVGTDSLSLFGQPLHLRLTLAEWAKDGL
LAIFFFVAGLELKRELVVGELSTLRSAALPVICATGGVVVPALIAFAVAHDDPRIASAWAIPIATDIAFALGILSLTGSR
LPSGARVFLLGLAVVDDLIAIVVIAVLFSTGLSLLWLGVAVAGCAAYALAQHRRITTPLLYIPLAALVWIAMLQSGVHAT
IAGVALGLLTRVRRDKGELEAPAERLEHRIQPFSALVCVPIFAFFASGVAINGEVFRALFTDKIALAIIAGLFFGKIIGI
FGSSTLAVKLRIAERPEGLFPRDILALSVLGAIGFTVSLLVAELSLGDGADLAKAAVLLTSLVASVIGSLLLLRRGRAHT
NT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nhaA1 YP_001220808.1 NahA family Na(+)/H(+) antiporter Not tested chp/tomA region Protein 5e-38 43