|
Name : Tpau_3915 (Tpau_3915) Accession : YP_003648826.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : family 5 extracellular solute-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4166 EC number : - Position : 4030907 - 4032538 bp Length : 1632 bp Strand : - Note : PFAM: extracellular solute-binding protein family 5; KEGG: rop:ROP_42430 ABC transporter substrate-binding protein DNA sequence : ATGGTGAGAAGACGAAGTAGGTCGACGGCGACGCGGGCGATCCTCGCGATCGCGGTGGCCGCGAGCCTGGCGGTATCGGG CTGCAGCATGCAGGGGGCGCGTTCGCAGAACACGGTGGGCCCCGACGCGATCATCCGGGTGAACGGCGGCGAACCGCAGA ACGGGTTGATCCCGTCGGACACCAGCGAGAACATGGGCGGCCGCGTGGTCGACTCCCTATTCACCGGTCTGTACAGCTAC AAGGCCGACGGCACGCCCGAGTTGGCGAACGCCGAGTCGGTCGAGACCACCGACAACAAGCGCTTCCTGGTCAAGCTCAA GCGGGACTGGAAGTTCACCGACGGCACGCCGGTCAAGGCGGAGAACTACGTGCGTGCCTGGAACTTCGGTGCCGCAGTGG GCAATCTGCAGAAGCAGCAGAGCTTCTACGCTCCGATCGCGGGTTTCGACGAGGTGTCCGAGAAGGGTGCCACGAAGACC GAGATGCGCGGCCTGCAGGTGATCGACGACTACACCTTCTCGATCGAACTGGCGGCGCCGAACATCGACTTCAAGCTTGC GTTGGGGTTCACACCGTTCGTTCCGCTCCCCGATGTCTTCTTCACCGAGGGTAAGGAGAAGTTCGGCCAGAACCCGGTGG GCAACGGGCCGTACAAACTCAAGCAGTGGCGGCACAACGTGCAGCTCGAGGTGGTGCGGTACGAGGACTACAAGGGTCCG AAGCCGAAGAACGGCGGGCTCACCTTCATCATGTACGAGTCCTACGATCCCGCGTACATCGACCTCACGTCCGGGAATCT CGACGCGCTCGACAACATCCCGAACAGCGCGCTGCGCTCGTTCCAGAAGACGCTGGGCAAGAAGGCGATCATCAAGTCGA CCGCGCAGACCCAGAACTTCGTGATCCCGCAGTTCCTGGAGCACTTCGGCAGCGACGAGGAGGGCCGCCTGCGCCGGCAG GCGATCTCCATGTCGTTCGACCGGCAGCAGATCATCGATGTGGTGTTCCAGGGCTTCCGGAATCCCGCGCTCGAGTTCAC CGCTCGCTCGATCCCCGGGTGGGACGGAAACATCCCCGGCAATGGCAACGTCAAGTACAACCCGGAGCTGGCCAAGCAGC GCTGGGCGCAGGCGAACGCGATCAAGCCGTGGACCGGATCGTTCACCATCGCCTACAACTCCGACGGCGATCACAAGCAG TGGATCGATGCGGTGACCAACCAGATCAAGAACACGTTGGGCATCGATGCGGCGGGCAAGCCCTACGCGACGTTCAAGCA GATCCGCGATGAGCTCACCAAGAAGACGATCAAGTCCGCGGGGCGCAGCGGTTGGCAGGGCGACTACCCGACGCAGCTCA ACTTCTTGGAGTCCAACTACCTCACTGGCGCTGGGTCGAATGACGGCGACTACAGCAATCCCGCGTTCGACGCCAAGATC GCCGAGGCGCAGCAGGCGCTCGACCCGGTGCAGTCGACCAGGCTCGTCAACGAGGCACAGGCGATCCTTCTCAACGACTT GCCCGTGGTCCCGCTGTGGGACTACAAGGCCGCGGCCGGCGTCGGCGACGGTGTCAAGGGTGATCTCACCTGGAACGGCC GCTTCGACTTCACCAACATCACGAAGGAGTAG Protein sequence : MVRRRSRSTATRAILAIAVAASLAVSGCSMQGARSQNTVGPDAIIRVNGGEPQNGLIPSDTSENMGGRVVDSLFTGLYSY KADGTPELANAESVETTDNKRFLVKLKRDWKFTDGTPVKAENYVRAWNFGAAVGNLQKQQSFYAPIAGFDEVSEKGATKT EMRGLQVIDDYTFSIELAAPNIDFKLALGFTPFVPLPDVFFTEGKEKFGQNPVGNGPYKLKQWRHNVQLEVVRYEDYKGP KPKNGGLTFIMYESYDPAYIDLTSGNLDALDNIPNSALRSFQKTLGKKAIIKSTAQTQNFVIPQFLEHFGSDEEGRLRRQ AISMSFDRQQIIDVVFQGFRNPALEFTARSIPGWDGNIPGNGNVKYNPELAKQRWAQANAIKPWTGSFTIAYNSDGDHKQ WIDAVTNQIKNTLGIDAAGKPYATFKQIRDELTKKTIKSAGRSGWQGDYPTQLNFLESNYLTGAGSNDGDYSNPAFDAKI AEAQQALDPVQSTRLVNEAQAILLNDLPVVPLWDYKAAAGVGDGVKGDLTWNGRFDFTNITKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0922 | YP_005160014.1 | putative peptide transport system secreted protein | Not tested | Not named | Protein | 5e-108 | 46 |
