|
Name : Tpau_3912 (Tpau_3912) Accession : YP_003648823.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 4027249 - 4029033 bp Length : 1785 bp Strand : - Note : KEGG: rer:RER_05000 ABC transporter ATP-binding protein; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA DNA sequence : ATGTCCGACGACCACAAGCGCAGTATCGCCGGCAAGATCAAGGACACCGTCAAGGACAAGGTCGCCGAGAAGTTCGGCAA GACACCGGATCCGCTGCTCGAGATACGCGATCTCATCGTGGAATTCACGGTGGCGGGCAAGCAGGTACCCGCCGTGCGCG GCGCGAACCTCACCGTGTATCCCGGGCAGACCGTCGCCATCGTCGGCGAGTCCGGATCGGGCAAGTCGACCACCGCGGCC GCGGTCCTGGGATTGCTCCAGGGCACCGGCAAGGTGGCGGGCGGCCAGATCCTTTTCGACGGGCAGGATCTGGCGAAGGC CTCCGAGAAGGACTTCCAACAGATCCGCGGTAGCGGCATCGGCCTGGTTCCGCAGGATCCGAACACGAACCTGAACCCGC TGTGGCGGGTCGGATATCAGATCCGGGAGACCCTCAAGGCCAATAACGCCGATCGAGGTGACGCGAAGAAGCGCGCTGTC GAGCTGCTGGACGAGGCGGGGATGCGTGATTCCGATAAGCGCGTCAATCAGTACCCGCACGAGTACTCGGGCGGTATGAA ACAGCGCGCGCTGATCGCGATCGGTCTCGCTGCCCGCCCCAAGCTTCTCATCGCCGACGAGCCGACCTCTGCACTGGACG TCACCGTGCAGCGGCAGATCCTCGATCACCTGGAGACGCTCACCGAGGATCTCGGAACGGCGGTGCTGCTGATCACGCAC GACCTGGGGCTCGCGGCGGAACGCGCCAGCCACCTCGTGGTGATGTACAAGGGGCGCGTAGTGGAATCCGGTCCCGCGCA GGAGATCCTGCAGAGTCCGCAGCACGCCTACACCAAGCGATTGGTTGCCGCGGCGCCGTCGCTCAACGCGCGGCGTGAGG ACGCCCCGTCGATCACCGACGTGGTCGAGCAGGAGAAGGCCGAGGAGGCGGGCGCGGATGCGCTCGCTGAGAAGGCCGGC GCGGCCTCGCGGGCGGAAGGCCCCGCCGAAGTGGTCGTCGCATCGCATCTGGTGAAAGACTTCCCGATTCGCGGCTCGGT GCCCTTCCAGAGCACCGATTTCCGCGCGGTCGACGACGTCAGCTTCACCATGCTGCGGGGCACCACCACCGCGATCGTGG GTGAGTCGGGCTCGGGTAAATCCACCGTCGCCCAGATGGTGCTCGGGTTGCTCGAACCCACGAGCGGCACCGTCGAATTC GACGGCGTCGACGTGACGACCCTGCGCGGCGCCGACGCCAAGCAGTTCCGACGGCGGGTGCAGCCGGTGTTCCAGAATCC GTACGGATCACTGGATCCCATGTATTCGGTGTACCGGGCGGTGTCCGAGCCGCTAGCAGTGCACGGCATCGGCAGCAAGG ACGAGCGAGTGGCGCGGGTGCGTGAACTGCTGGAGATGGTGGCGCTGCCGCCGGACACCATGCACCGCTACCCGAACGAG CTCTCGGGTGGACAGCGGCAGCGCGTCGCGATCGCTCGGGCGCTTGCACTCAATCCCGAGGTCGTGGTGCTCGACGAGGC TGTCTCTGCGCTCGATGTTCTGGTGCAGGCGCAGATCTTGATCCTGCTGGAGAATCTTCAGAAGGAACTCGGGCTGACGT ACCTGTTCATCACGCACGATCTGGCCGTGGTCAAGCAGATCGCGCACCAGACGATCGTGATGTCGCGCGGCAAGGTGGTG GACTCCGGTCCCACGGATCAGGTCTACGACAATCCCTCGTCGGACTACACCCGGAAGCTGATCGACGCCATTCCCGGTGG CTCGATCGAGCTGGCGGCGGGCTGA Protein sequence : MSDDHKRSIAGKIKDTVKDKVAEKFGKTPDPLLEIRDLIVEFTVAGKQVPAVRGANLTVYPGQTVAIVGESGSGKSTTAA AVLGLLQGTGKVAGGQILFDGQDLAKASEKDFQQIRGSGIGLVPQDPNTNLNPLWRVGYQIRETLKANNADRGDAKKRAV ELLDEAGMRDSDKRVNQYPHEYSGGMKQRALIAIGLAARPKLLIADEPTSALDVTVQRQILDHLETLTEDLGTAVLLITH DLGLAAERASHLVVMYKGRVVESGPAQEILQSPQHAYTKRLVAAAPSLNARREDAPSITDVVEQEKAEEAGADALAEKAG AASRAEGPAEVVVASHLVKDFPIRGSVPFQSTDFRAVDDVSFTMLRGTTTAIVGESGSGKSTVAQMVLGLLEPTSGTVEF DGVDVTTLRGADAKQFRRRVQPVFQNPYGSLDPMYSVYRAVSEPLAVHGIGSKDERVARVRELLEMVALPPDTMHRYPNE LSGGQRQRVAIARALALNPEVVVLDEAVSALDVLVQAQILILLENLQKELGLTYLFITHDLAVVKQIAHQTIVMSRGKVV DSGPTDQVYDNPSSDYTRKLIDAIPGGSIELAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-171 | 61 |
