Gene Information

Name : Tpau_3775 (Tpau_3775)
Accession : YP_003648692.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3897250 - 3898047 bp
Length : 798 bp
Strand : +
Note : KEGG: sco:SCO7217 iron ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGAGCGGCATCGACGTCCGCGCGGTCACCGTCGTGCTCGATGGCACCACCATCATCGACGGGGTCTCCGTGGTCGCCCG
GCCCGGTGAGATCACCGGGGTGATCGGTCCGAACGGCAGCGGCAAATCCACGCTGCTGCGCACCGTCTACCGACACCTCA
AACCTGTGGCCGGCGGGGTGCTGATCGGTGACGACGATCTGCGCGATCTCTCGCCCGCCGCCGCCGCCCGGCGGATCGCC
GCGATGCCCCAGGAGCGCGGCTCCGATTTCGACGTGACGGTCCGCGATGTGGTCGCGCTCGGCCGGATCCCGCACCAGGG
CGGGTTCGGCCGCGAGTCAGCCGTGGACCGCGATCGGATCACGACGGCCCTCGCCGATGCCGAGCTCACCGCCCTGGCGC
ACCGGAGCTTCGCGTCGCTGTCCGGCGGCGAGCGGCAACGGACGCTGCTCGCACGGTGTTTCGCCCAGGGCGGCGAGGTG
CTGGTGCTCGACGAGCCCACCAACCATCTCGATCTCGCCCATCAGGCGCAGTTGCTCACGCTGCTGAAACGGCGATCGGC
GACCACGCTGATCACCGTGCACGACCTCAATACCGCTGCCGCGGTGTGTGATCGACTGTTCGTACTGTCCGCAGGGCGGA
TCGTCGCCGGCGGCACCCCGGCCGAGGTACTGACCCGCGACCTGCTCGACGATGTCTTCTCCGTTCACGCCGAGGTGATC
GAGCACCCCGTCACCGGCCGGTTGCTGGTGGCCGTGGACTATCTCCGCGACATGCCCGGCGGCAGCCCGCCGTCGTGA

Protein sequence : 
MSGIDVRAVTVVLDGTTIIDGVSVVARPGEITGVIGPNGSGKSTLLRTVYRHLKPVAGGVLIGDDDLRDLSPAAAARRIA
AMPQERGSDFDVTVRDVVALGRIPHQGGFGRESAVDRDRITTALADAELTALAHRSFASLSGGERQRTLLARCFAQGGEV
LVLDEPTNHLDLAHQAQLLTLLKRRSATTLITVHDLNTAAAVCDRLFVLSAGRIVAGGTPAEVLTRDLLDDVFSVHAEVI
EHPVTGRLLVAVDYLRDMPGGSPPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-33 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_3775 YP_003648692.1 ABC transporter BAC0164 Protein 1e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_3775 YP_003648692.1 ABC transporter VFG1042 Protein 1e-34 42