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Name : Tpau_3772 (Tpau_3772) Accession : YP_003648689.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3894605 - 3895183 bp Length : 579 bp Strand : + Note : KEGG: mab:MAB_3428c RNA polymerase sigma-C factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 DNA sequence : ATGCCGAATCCGGATGCCGATGTCAGTGCGGCGACCGCCGCCGCACTGCGTGCCGGCCGGGGCGACGGAACCGCCCTCGC GGAGTTCGTCGCCCTGACCCAGCACGATGTGCGACGGTTCGTGGCGCTGGTCGCCGGGGCCGACGAGGCGGACGATCTGG TGCAGGAGACCTACCTGCGCGCCTTCGGCTCGCTGCATCGCTTCGAGGGCCGATCCTCGGCCCGGACCTGGCTCACCAGC ATCGCCCGACATGTGGTGATCGACGCGATACGCCACCGCACCGCCCGCCCCAGCACACCCGTCGGCGACGGGACCGATCT GGATGGTCTCGCCGCCGCGCCGCATCGCGACCTGCCCGAACACGCTCGCGTCGAACTACGCGACCTGCTCGAACGGATCG ATGACGACCGCCGCGAGGCCCTGGTGCTGACCCAGGTGATCGGATTCAGCTACGCCGAAACCGCGCAGATCGTGGGGTGC GCCATCGGCACCATCCGCTCGCGGGTGGCACGAGCTCGCACCGACCTCCACACCCTGGTTCACGGCGAAGCCGCCGACCC GACCCGCGCCGCGGGCTGA Protein sequence : MPNPDADVSAATAAALRAGRGDGTALAEFVALTQHDVRRFVALVAGADEADDLVQETYLRAFGSLHRFEGRSSARTWLTS IARHVVIDAIRHRTARPSTPVGDGTDLDGLAAAPHRDLPEHARVELRDLLERIDDDRREALVLTQVIGFSYAETAQIVGC AIGTIRSRVARARTDLHTLVHGEAADPTRAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 3e-21 | 50 |
