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Name : Tpau_3603 (Tpau_3603) Accession : YP_003648520.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3715878 - 3717434 bp Length : 1557 bp Strand : - Note : KEGG: rha:RHA1_ro03312 ABC peptide transporter ATP- binding component; PFAM: ABC transporter; SMART: ATPase AAA DNA sequence : ATGACCGATCCCGTGCCACTGTGCATCGAGCACCTCACCGTCAGCGGGCCCCAGGGCACGACCCTGGTGGACAGGCTCGA CCTCGACATCGCGGCGGGCGAGATCGTCGCCCTGGTCGGCGAATCCGGCTCCGGCAAGTCGCTCACAGGACGCGCCATCC TCGGACTCCTACCCGACGGTGTGCACGCCACCGGCAGCATTCGGCTCCTCGGCCGGCAGGTGATCGGGCTCGCGGAAGCC GAACTGCGCGAGCTTCGGGGACCGGGTGCCGCCGTGGTGTTCCAGGAACCGCAGACCGCACTGAACCCCTCGCAGCGGAT CTGGCGGCAGATCCACCAGGTGCTCCGGGCACACCGAAAGGTGAGTAGCCGGGTGGCGAAGCGACGAACCGTGGAACTCC TCACCGATGTGGGAATCCCCGACCCGGAGATCCGGGCGAAGCAGTATCCGCATCAACTCTCGGGCGGCCAGAAACAACGC GTGGTGATCGCGCTCGCGTTGGCGGCAGACCCGAAGCTACTGATCGCCGATGAACCCACCACCGCACTCGACGTGACCGT GCAGGCTCAGATCCTGCAACTGCTTCGAGATCTGCGCGACCGACGCGGCCTGGCCGTGCTGCTGATCTCGCATAACCTCG GCGTCGTCGCCGATCTGGCCGACCGGGTCACCGTGGTCCGGGCCGGGGCCACCATCGAATCAGCAGCCGTCGATGAGCTG TTCACCTCGCCGCGCGAGGGCTACACGCGCGAGCTTCTAGCCGCCGTCCCGCGGCTTCCGTCGAGTCCGGGCGCCGCGGC CGAGACCGTCGCGGCGCCGGTCGCGGACGTCCGCGACCTCCGGGTCGCGTTCGGCGGTGTACACGCGCTGGACGGTGTCG ACCTCACCATCGGAGCGGGTGAGGTAGTCGGGTTGGTCGGAGAATCCGGCTCGGGGAAGACCACGTTGGGCCGAGTGCTG CTCGGCCTGGAGCGGGTCGGCGGCGGCGCCGTCGACATCGCCGCGCGTCGGCTCGCGGTGATTCACCAGGACCCCTACGC CGCACTCGATCCGCGCTGGACGGTGGAGCGGATCGTGGCCGAGCCGCTGCGCATCGGTGGCGAGCGCGACCGCGCAGTGC TCCGGGCCAGGGCGGCCGAGCTGATCGATGCTGTCCGACTCCCCGCCGAGGTGCTACGACGGCGCCCCCGAGAGCTGTCC GGTGGGCAACGTCAGCGGGTGGCCTTCGCCCGGGCGCTCTCGATGTCCCCCGAGCTGTTGGTGGCCGACGAGCCGACCAG CGCCCTCGACGTCTCGGTGCAGGCCGACGTCCTCGATCTGTTCCGGGACCTACAGGCGGAGTTCGGGTTCGCGTCGGTGT TCATCACGCACGACCTCGCGGTGGTCGGCCAGGTGGCGGACCGCGTGGTGGTGCTGCGGCGCGGGCAGGTGGTGGAGGAG GGGCCTGCCCGGGCACTGCTGGCGACGCCTCGATCGGACTACGTGCGTGAGCTGGTCGCAGCGGTCCCGCAGCCGGATCC TGGTGCCCAGCGAGCACGGAGAGAGAGGCGGGAGTGA Protein sequence : MTDPVPLCIEHLTVSGPQGTTLVDRLDLDIAAGEIVALVGESGSGKSLTGRAILGLLPDGVHATGSIRLLGRQVIGLAEA ELRELRGPGAAVVFQEPQTALNPSQRIWRQIHQVLRAHRKVSSRVAKRRTVELLTDVGIPDPEIRAKQYPHQLSGGQKQR VVIALALAADPKLLIADEPTTALDVTVQAQILQLLRDLRDRRGLAVLLISHNLGVVADLADRVTVVRAGATIESAAVDEL FTSPREGYTRELLAAVPRLPSSPGAAAETVAAPVADVRDLRVAFGGVHALDGVDLTIGAGEVVGLVGESGSGKTTLGRVL LGLERVGGGAVDIAARRLAVIHQDPYAALDPRWTVERIVAEPLRIGGERDRAVLRARAAELIDAVRLPAEVLRRRPRELS GGQRQRVAFARALSMSPELLVADEPTSALDVSVQADVLDLFRDLQAEFGFASVFITHDLAVVGQVADRVVVLRRGQVVEE GPARALLATPRSDYVRELVAAVPQPDPGAQRARRERRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-67 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-67 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-67 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-67 | 43 |
