Gene Information

Name : Tpau_2980 (Tpau_2980)
Accession : YP_003647915.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3092144 - 3092911 bp
Length : 768 bp
Strand : +
Note : KEGG: mlo:mll9179 ABC transporter ATP-binding subunit; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence :
ATGGCAGAGCACGTTGGCCCACTGAACGATTCCCCCGCCGACGAGCCGGTGATCGTCGCGCAGAACCTGGTGCGCGGGTT
CGACGGCCGGGCGGTGTTGCGCGGCGTCGACCTGACGATTCGCCGGGGCGAATTCGTCGCTCTGCTGGGCCGGTCCGGTT
CGGGCAAGTCGACGCTCCTGCGCGCTATCGCCGCTTTGGACGACGGTGTGCCCGGTTCGGGCCTGCTGGAGGTGGATCCG
AGCCGCGCCGTGGTGTTCCAGGACTCGCGCCTGCTGCCCTGGGCGCGTGTGCTGGAGAACGTGGTGCTCGGCCTCACCGG
CGCCGACGCCAAGGACGTGGGCCGCGCACTGCTCGCGGAGGTCGGCCTCGCGGGACGAGAGAAGGCCTGGCCGAAGGAGC
TTTCCGGCGGACAGCAGCAACGAGTGGCGCTGGCTCGCAGCCTGGTCCGGGAACCGGCGGTACTCCTGGCCGACGAGCCC
TTCGGGGCGCTCGACGCGCTCACCAAACTGAAGATGCACGATCTGCTGCGCGCGCTGGTCGCTCGACACCGGCCCGGTGT
GCTTCTGATCACCCACGACGTGGACGAAGCCATCGTCCTGGCCGACCGGATCCTGGTGCTCGATCACGGCATTCTCTCGG
TCGATCTGGAACTCTCCGACGAAACGGGCCGCCGACCGGGCGAGAACGGATTCGCAGAGCTTCGCAGCCGGCTCCTCGAT
GCGCTCGGTGTGGAGCGCGAGCCCGAGCCGGTGACCGCGCCCGCATGA

Protein sequence :
MAEHVGPLNDSPADEPVIVAQNLVRGFDGRAVLRGVDLTIRRGEFVALLGRSGSGKSTLLRAIAALDDGVPGSGLLEVDP
SRAVVFQDSRLLPWARVLENVVLGLTGADAKDVGRALLAEVGLAGREKAWPKELSGGQQQRVALARSLVREPAVLLADEP
FGALDALTKLKMHDLLRALVARHRPGVLLITHDVDEAIVLADRILVLDHGILSVDLELSDETGRRPGENGFAELRSRLLD
ALGVEREPEPVTAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-25 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 41