Gene Information

Name : Tpau_2969 (Tpau_2969)
Accession : YP_003647904.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 3081207 - 3083390 bp
Length : 2184 bp
Strand : -
Note : TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; KEGG: rer:RER_23520 ribonucleoside-diphosphate reductase alpha chain; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase domain protein; ribonucleotide reductase large subun

DNA sequence :
ATGACCGCAACCCAAGAAGACCTCGCACCCTCCGTCAGCCAGTCCGGCGTCCACGCCGGTCCGGGCGGCCACTCCGAGCT
CGACTTCCACGCGCTCAACGCGATGCTGAACCTGTACGACCGGGACGGCAACATCCAGTTCGACAAGGACCGAGAGGCGG
CGCGGCAGTACTTCCTGCAGCACGTCAACCAGAACACGGTGTTCTTTCACAACCTCGACGAGAAGCTCGATTACCTCGTC
GAGGAGAACTACTACGAGCCCGAGGTGCTGGACAAGTACAGCCGCGCCTTCGTCAAGAACCTCTTCGATGCCGCCTACGC
CAAGAAGTTCCGGTTTCCCACCTTCCTGGGCGCGTTCAAGTACTACACCAGCTACACGCTGAAGACCTTCGACGGTAAGC
GGTATCTGGAGCGCTTCGAGGATCGTGTGTGCATGGTGGCGCTCACCCTCGCCGATGGCGACGAGAAGCTGGCAACAAGC
CTGGTCGACGAGATCATCGCGGGCCGCTTCCAGCCGGCCACCCCCACCTTCCTGAACTCGGGCAAGAAGCAGCGTGGCGA
GCCCGTCTCCTGCTTCCTGCTGCGCATCGAGGACAACATGGAGTCGATCGGCCGCTCCATCAACTCGGCGCTGCAACTGT
CCAAGCGCGGCGGTGGAGTGGCGCTGCTGCTCAGCAACATCCGCGAGCACGGCGCGCCGATCAAGAAGATCGAGAACCAG
AGCTCCGGCGTCATCCCGATCATGAAGCTGCTGGAGGACTCCTTCAGCTATGCCAACCAGTTGGGCGCCCGCCAGGGCGC
GGGCGCGGTGTACCTGCACGCGCACCACCCCGATATCTACCGCTTCCTCGACACCAAGCGCGAGAACGCGGATGAGAAGA
TCCGCATCAAGACGCTGAGTCTCGGCGTGGTGATCCCCGACATCACCTTCGAGCTGGCCAAGAACAACGACGACATGTAC
CTGTTCTCGCCGTACGACGTGGAGCGCGTGTACGGGGTTCCCTTCGCGGACGTCAACGTCACGGAGAAGTACCACGAGAT
GGTCGACGACTCGCGGATCCGCAAGACCAAGATCAACGCCCGCGAGTTCTTCCAGACGCTCGCCGAGCTGCAGTTCGAGT
CGGGCTACCCGTACATCATGTACGAGGACACCGTGAACCGGGCGAACCCGATCGCGGGCAAGATCACTCACTCCAACCTG
TGCAGCGAGATCCTGCAGGTGTCCACGCCGTCCACGTACAACGACGACCTGTCCTATGCCGAAATCGGCAAGGACATCTC
GTGCAACCTGGGCTCGCTGAACATCGCGAAGACCATGGACAGCCCCGACTTCGGCGCCACCATCGAGACCGCGATCCGCG
GCCTCACCGCGGTCTCGGACCAGACCGCCATCACGTCGGTGCCGTCGATCGAGCACGGCAACAACCTGAGCCATGCCATC
GGTCTGGGGCAGATGAACCTGCACGGCTACCTCGCCCGTGAGCGCGTCTTCTACGGTTCGGAGGAGGGCGTCGACTTCAC
GAACATCTACTTCTACACGGTGCTCTTCCACGCGATCCGCGCCTCGAACGCCATCGCACGGGAGCGCGGTCAGTCCTTCG
GAGGCTTCGAGGACAGCAAGTACGCGTCGGGCGAGTTCTTCGACAAGTACATCGATCAGGAGTGGAAGCCGGCCACCGAC
AAGGTGATCGGGTTGTTCGCCGACTCCGAGATCCGCATCCCCACGCAGGACGACTGGCGCGCGCTCAAGGCCGATGTGCA
GCAGTACGGTCTGTACAACCAGAACCTGCAGGCCGTGCCGCCCACCGGTTCGATCAGCTACATCAACCACTCCACCAGCT
CGATCCACCCCGTTGCGGCGAAGATCGAGATCCGCAAGGAGGGGAAGATCGGCCGCGTCTACTACCCGGCGCCCTACATG
GACAACGACAACCTGGAGTACTACCAGGATGCCTACGAGATCGGGTACGAGAAGATCATCGACACCTACGCCGCGGCCAC
GCAGCACGTGGATCAGGGCCTGTCGCTGACGCTGTTCTTCAAGGACACCGCCACCACCCGCGATGTGAACCGTGCCCAGA
TCTACGCATGGCGCAAGGGGATCAAGACCCTGTACTACATCCGCCTGCGGCAGATGGCGCTCGAGGGCACTGAGGTCGAG
GGCTGCGTCAGCTGCATGCTGTAG

Protein sequence :
MTATQEDLAPSVSQSGVHAGPGGHSELDFHALNAMLNLYDRDGNIQFDKDREAARQYFLQHVNQNTVFFHNLDEKLDYLV
EENYYEPEVLDKYSRAFVKNLFDAAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGDEKLATS
LVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNIREHGAPIKKIENQ
SSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKNNDDMY
LFSPYDVERVYGVPFADVNVTEKYHEMVDDSRIRKTKINAREFFQTLAELQFESGYPYIMYEDTVNRANPIAGKITHSNL
CSEILQVSTPSTYNDDLSYAEIGKDISCNLGSLNIAKTMDSPDFGATIETAIRGLTAVSDQTAITSVPSIEHGNNLSHAI
GLGQMNLHGYLARERVFYGSEEGVDFTNIYFYTVLFHAIRASNAIARERGQSFGGFEDSKYASGEFFDKYIDQEWKPATD
KVIGLFADSEIRIPTQDDWRALKADVQQYGLYNQNLQAVPPTGSISYINHSTSSIHPVAAKIEIRKEGKIGRVYYPAPYM
DNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNRAQIYAWRKGIKTLYYIRLRQMALEGTEVE
GCVSCML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 80