Gene Information

Name : Tpau_2708 (Tpau_2708)
Accession : YP_003647645.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2813372 - 2814361 bp
Length : 990 bp
Strand : -
Note : TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; KEGG: mgi:Mflv_1936 daunorubicin resistance ABC transporter ATPase; SMART: ATPase AAA

DNA sequence :
ATGACCGACTCAGCCCCGGGCGATTGGGCCATCGAGGCCATCGACCTCGTCAAACGATTCGACGATTTCACCGCCGTGGA
CGGCGTGAGCTTCCGGGTTCCCACGGGAAGCGTGCTCGGCATGCTCGGACCGAACGGTGCGGGCAAGACGACCACGGTCC
GGATGATGACCACGCTGTCGCCGCCCACCTCGGGTACCGCCCGCATCGCGGGATACGACGTGATCGACGATCCCGCACAG
GTCCGGCGCAACATGGGCCTCACCGGCCAGGCGGCGACGGTCGACGAGATCCTCACGGGCCGCGAGAACCTGCGCATGAT
CGGTGGCCTCTACGGCATTCCCAAGGCCGTGCTGAAGGGGCGCAGCGACGACCTATTGGAGCAATTCTCCCTGACCGACG
CGGGGGACAAGCAGGTCAAGGCGTATTCCGGCGGTATGCGGCGCCGGCTCGATCTGGCGGTCAGCCTGCTCACCGCTCCG
CCGGTGCTGTTTCTCGACGAGCCCACCACGGGCCTCGATCCGCGCGCCCGCTCCGAGCTGTGGGACGTGTTGCGCGACCT
GGTCGCACAAGGCACCACCCTTCTGCTGACCACCCAATACCTGGAGGAGGCCGATCAGCTCGCGGACGACATCGTGGTGA
TCGACAAGGGCAAGGTGATCGCCCAGGGCACTCCGCTGCAACTCAAGGAGCGGGCCGGGGCGGCCAGCCTGGTGATCACC
GTGTCCTCCGCGGCGGACATACCCCGCGCCCGCGAGATACTCGCCGGGCTCGGCAGCGAGGTGTACGTCGACGAGGGCGC
CCGCCGGGTCAGCAGCTCCGCCAACGGCCTGGCCGATCTGAACCGGGTCGCGGCGCTCTTCGAGGACAGCGGCATCGATG
TCGACGATCTCGGGCTCGCCCGGCCCAGCCTCGATGACGTCTTCCTCTCGCTCACCGGCCAACGCGCCGAACCCAGCCAG
CAGCTCGATGCCGAGGAGATGAACCCGTGA

Protein sequence :
MTDSAPGDWAIEAIDLVKRFDDFTAVDGVSFRVPTGSVLGMLGPNGAGKTTTVRMMTTLSPPTSGTARIAGYDVIDDPAQ
VRRNMGLTGQAATVDEILTGRENLRMIGGLYGIPKAVLKGRSDDLLEQFSLTDAGDKQVKAYSGGMRRRLDLAVSLLTAP
PVLFLDEPTTGLDPRARSELWDVLRDLVAQGTTLLLTTQYLEEADQLADDIVVIDKGKVIAQGTPLQLKERAGAASLVIT
VSSAADIPRAREILAGLGSEVYVDEGARRVSSSANGLADLNRVAALFEDSGIDVDDLGLARPSLDDVFLSLTGQRAEPSQ
QLDAEEMNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 2e-57 50
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 2e-57 50