Gene Information

Name : Tpau_2666 (Tpau_2666)
Accession : YP_003647605.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 2771073 - 2771864 bp
Length : 792 bp
Strand : +
Note : KEGG: ypb:YPTS_4078 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
GTGAACACCACTGCGACACCCGCCATCGAATTCGCAGATCTCACCAAGTCGTACGCGCAGACCGTGGTCCTGGGCCCCGT
CTCCGGTGCCTTCGACCGGGGCGGGATCACCGCGCTGGTCGGCCCGAACGGTGCCGGTAAATCCACACTGCTCACCATCC
TGGGACGCCTGCTGACGCCGGACTCGGGCACCGCGCTGCTCAACGGCCGGGCGGTGGCATCGATGAAGCCCACCGAGATC
GCCCGCACTCTGGCGATCCTGCGCCAGGAGAACGGCGTCAACGCCCGGCTCACGGTGCGCGATCTGGTGGCATTCGGCCG
CTTCCCGCACAGCCGCGGCCGGCTCACCACCGACGATGTGCGGCACATCGATGATGCGCTCGGCTTCCTCGGTCTCACCG
AGCTGTCCGACCGGTTCCTCGACGAACTGTCGGGCGGCCAGCGCCAGCGCGCGTATGTGGCGATGACGCTGGCGCAGGAC
ACCGAGGTGATCCTGCTCGACGAGCCGCTCAACAATCTCGACATGCGGCACCAGGTGGGCATGATGGGCCAGCTGCGGCG
GGCCGCCGACGAGCTCGGTAAGACGATCATCCTGGTGGTGCACGACCTGAATTTCGCCGCGGCGTACGCGGACCGGATCG
TCGCACTCAAGCACGGCAGCATCGCGGCCTCGGGCACACCCGCCGAGATCATGGACTCCGAACTCCTCACCGGGATCTTT
CAGACCCCCGTCGCGGTGCACTCCGTGAACGGGCTCCGGGTCGCGGTGTACGCGGGGATGGATCGACGGTGA

Protein sequence : 
MNTTATPAIEFADLTKSYAQTVVLGPVSGAFDRGGITALVGPNGAGKSTLLTILGRLLTPDSGTALLNGRAVASMKPTEI
ARTLAILRQENGVNARLTVRDLVAFGRFPHSRGRLTTDDVRHIDDALGFLGLTELSDRFLDELSGGQRQRAYVAMTLAQD
TEVILLDEPLNNLDMRHQVGMMGQLRRAADELGKTIILVVHDLNFAAAYADRIVALKHGSIAASGTPAEIMDSELLTGIF
QTPVAVHSVNGLRVAVYAGMDRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-43 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-35 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-40 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-40 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-40 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_2666 YP_003647605.1 ABC transporter BAC0164 Protein 2e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_2666 YP_003647605.1 ABC transporter VFG1042 Protein 2e-43 44
Tpau_2666 YP_003647605.1 ABC transporter VFG0925 Protein 4e-38 42