Gene Information

Name : Tpau_2562 (Tpau_2562)
Accession : YP_003647504.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 2658018 - 2658641 bp
Length : 624 bp
Strand : -
Note : TIGRFAM: riboflavin synthase, subunit alpha; KEGG: mkm:Mkms_2436 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein

DNA sequence :
ATGTTCACCGGCATCGTCGAAGAACTGGGCGTGATCACAGCCCGCGACGACCTCCCCGATGCGGCCCGATTCACCGTTCG
TGGCGACCTGGTCACCTCCGATGCCAAGCACGGCGACTCCATCGCGGTCAACGGTGTGTGCCTGACGGTCGTCACGGTCG
AGGGCGGCGCGTTCACCGCGGACGTCATGGAGGAGTCCCTCCGCCGCAGCTCGCTGAGCAAACTCGGCCCGGGCGATCGT
GTGAACCTCGAACGGGCCGCGGCTGTGAATTCCCGGCTCGGCGGCCATATCGTGCAGGGCCACGTGGACGGCACGGGCCA
TGTGATCAGTCTCAGCCCGTCCGAGCACTGGACCGTGGTACGCCTGGCCCTGCCCACCGCACTCGCCCGCTACGTTGTCG
AAAAGGGATCCATCACGATCGACGGCGTCTCCCTCACCGTCTCCGCGCTCGGTCGCGGCGTCCCCGGCGACGACGCGCAG
CACTGGTTCGAGGTCTCGTTGATCCCCACCACGCTGGAATTGACCAACCTGGGCGGGGCCGAACCGGGCACCATCGTCAA
CCTCGAAGTGGACATCGTCGCGAAGTACGTCGAGCGTCTCGTGACGCTCAAGGAGGAGAAGTAG

Protein sequence :
MFTGIVEELGVITARDDLPDAARFTVRGDLVTSDAKHGDSIAVNGVCLTVVTVEGGAFTADVMEESLRRSSLSKLGPGDR
VNLERAAAVNSRLGGHIVQGHVDGTGHVISLSPSEHWTVVRLALPTALARYVVEKGSITIDGVSLTVSALGRGVPGDDAQ
HWFEVSLIPTTLELTNLGGAEPGTIVNLEVDIVAKYVERLVTLKEEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 3e-27 43
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 3e-27 43