Gene Information

Name : Tpau_0245 (Tpau_0245)
Accession : YP_003645234.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 255666 - 256460 bp
Length : 795 bp
Strand : -
Note : KEGG: fre:Franean1_0530 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence :
GTGCCACCAAAGCTGGAGCACATCGAGCGCTGGCTGCTTCTGAAGTCCGTGACCTACCAAGTCTCCCCCAATGTGCAATC
AAGTGGTGCTGCCGTATTGCAGATCTGCGGGTTGACCTACGCTGCCGGCCATCCGTCGTCAACGATCGTCAAGGACGTGA
ACCTTACTGTCAGGGCAGGGGAGTCAGTTGCGGTCATGGGCCGGTCTGGCTCCGGCAAGAGTTCGCTGCTCAAGCTTGGT
GGTGGGCTCCTGCAGCCGACGGCGGGATCGGTTTCTGTGGCTGGCACCCGCATAGACGACCTAGGGGAGAAGGGGCGGGC
ACTGGTCCGCCGTGGACCCGTGGGTTTCATATTCCAGGGCTTGAACCTTATCGAGAATCTCAGTGTCGCCGACAATCTCG
ATGTTGCCGGGCGCATCCGCGGGCGGCGCTACACGTCCGCCGAGAAGACCGCTGCGCTAGAGACGGTAGGACTGGCGGCG
ATGGGGTCGCGTCTGGTCGAAGACCTTTCGGGCGGCGAGGCGCAGCGTGTCGCCATCGCCCGCTCCTTGATGAGCAAGCC
CACGATAGTGTTCGCGGACGAGCCGACGGGTGCACTGGATTCGACGAACGCAGCGAATGTCACCTCACTGTTTAAGGACG
TTGTTGCAGCCGGCAGTGCGATGGTTGTAGCTACCCACGATCCCATCGTTGCTGCGAACACCAGCCGGGTGGTCTTTCTC
TCCGACGGCAGGATCGTTGGAGAGTTGTCCTCGCCCTCCGCGGAGGAGATCGCCCGGCGTGTTATCGCCCTGTAG

Protein sequence :
MPPKLEHIERWLLLKSVTYQVSPNVQSSGAAVLQICGLTYAAGHPSSTIVKDVNLTVRAGESVAVMGRSGSGKSSLLKLG
GGLLQPTAGSVSVAGTRIDDLGEKGRALVRRGPVGFIFQGLNLIENLSVADNLDVAGRIRGRRYTSAEKTAALETVGLAA
MGSRLVEDLSGGEAQRVAIARSLMSKPTIVFADEPTGALDSTNAANVTSLFKDVVAAGSAMVVATHDPIVAANTSRVVFL
SDGRIVGELSSPSAEEIARRVIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42