Gene Information

Name : Tpau_2396 (Tpau_2396)
Accession : YP_003647341.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 2491606 - 2493054 bp
Length : 1449 bp
Strand : -
Note : KEGG: nfa:nfa19630 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase

DNA sequence :
TTGAGCGAGAACGCGGGTAACGCCGGGAAGCACGGCACCAACGAGGGCAGCCTCTGGGGCGGACGGTTCGCGTCCGGCCC
CGCCGAGGCGATGGCCGCGCTGAGCAAGTCCACGCACTTCGACTGGGCGCTGGCCCCGTACGACGTGCGCGCGTCGCAGG
CGCACGCCCGCGTGCTCAACCGCGCGGGGCTGCTGTCCGACGCGGACCTGGAGGCCATGCTCGCGGCGCTCACCCGACTC
GGGGACGACGTCGCTTCCGGCGCCTTCCAACCGGCCGAGTCCGACGAGGACGTGCACGGTGCGCTGGAACGCGGGCTCAT
CGAGCGGGCCGGCCCCGAGGTCGGCGGCCGGCTGCGCGCGGGCCGGTCGCGGAACGACCAGGTGGCCACCCTCTTCCGGA
TGTGGCTGCGCGACGCGGTGCGGCTGGTCGCCGTCGGCGTGCTCGACGTGGTGGACGCCTTCGTCGCGCAGGCGCAGGCC
AACCCCGACGTGATCCTGCCCGGTAAAACGCACCTGCAGGCCGCGCAGCCGATCCTGCTCTCGCACCACCTGCTCGCCTA
CACGCATCCGTTGCTGCGGGATGTGCAGCGGCTGCAGGATCTGGACAAGCGGATCGCGATCTCGCCGTACGGTTCCGGTG
CCCTGGCCGGGTCGTCGCTGGGGCTCGATCCGGATGCCATCGCGGCCGATCTCGGTTTCGATTCCGCGGCGGATAACAGC
CTCGACGCCACCGCCTCACGCGATTTCGCCGCCGAGGCGGCGTACGTGTTCGCGCAGATCGCCGTGGACCTGTCGCGCTG
GTCCGAGGATGTGATCCTGTGGAGCACGGCCGAGTTCGGCTACATAACTCTCGCGGACGCGTGGTCCACGGGCAGTTCGA
TCATGCCGCAGAAGAAGAATCCCGATGTCGCCGAGCTCTCCCGCGGCAAGGCCGGCCGGCTCATCGGCAACCTGTCGGGA
CTGCTGGCGACGCTCAAGGCGCAGCCGCTCGCGTACAACCGCGACCTGCAGGAGGACAAGGAGCCGGTGTTCGATTCGGT
GGAGCAGCTGCGGCTGTTGCTGCCGGCCGTCGCCGGGCTCACCGCCACGCTCACCTTCCACCCGGACCGCATGGGTGCTT
TGGCCCCGGCCGGTTTCACCCTCGCCACGGACGTGGCGGAATGGATGGTGCGGCAGGGAGTGCCCTTCCGCGTCGCGCAC
GAGGCGGCGGGCGAGTGCGTGCGCGCCGCCGAGTCCCGCGGCGTCGGCCTCGACGGTCTCACCGACGAGGAGTTCGCGGC
GATCCACCCGGCGCTCACCCCGCAGGTCCGCGAGGTGCTCACGGTGCGCGGCTCCGTCTCCTCCCGTGACGCCCGCGGCG
GCACCGCCCCGTCGGCGGTGGAGAAGCAGCTCGAGCGCGTTACCGCCACCCTGCCCGCTCTCCGCACCTGGGCCGAAACC
ACCGCCTAA

Protein sequence :
MSENAGNAGKHGTNEGSLWGGRFASGPAEAMAALSKSTHFDWALAPYDVRASQAHARVLNRAGLLSDADLEAMLAALTRL
GDDVASGAFQPAESDEDVHGALERGLIERAGPEVGGRLRAGRSRNDQVATLFRMWLRDAVRLVAVGVLDVVDAFVAQAQA
NPDVILPGKTHLQAAQPILLSHHLLAYTHPLLRDVQRLQDLDKRIAISPYGSGALAGSSLGLDPDAIAADLGFDSAADNS
LDATASRDFAAEAAYVFAQIAVDLSRWSEDVILWSTAEFGYITLADAWSTGSSIMPQKKNPDVAELSRGKAGRLIGNLSG
LLATLKAQPLAYNRDLQEDKEPVFDSVEQLRLLLPAVAGLTATLTFHPDRMGALAPAGFTLATDVAEWMVRQGVPFRVAH
EAAGECVRAAESRGVGLDGLTDEEFAAIHPALTPQVREVLTVRGSVSSRDARGGTAPSAVEKQLERVTATLPALRTWAET
TA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 3e-64 41
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 3e-64 41