Gene Information

Name : Tpau_2051 (Tpau_2051)
Accession : YP_003647002.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2136057 - 2136845 bp
Length : 789 bp
Strand : -
Note : KEGG: sgr:SGR_5757 ABC transporter ATP- binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence :
GTGACCGCGCCGACCCCGCCGCGGCTCGAAGCCGTCGGCCTCAGCAAGACCTTCGGGCACGACCAGGTGCTCCGCGGCGT
CGACCTGACCGTCGCGCCGGGCGAGGTGGTCTCGATCATCGGTCCCTCGGGTTCGGGCAAGTCGACTCTGCTCCGCTTGC
TCAATCATCTGGAAGAGCCGACCGCCGGCGTGGTGCGACTCGACGGTGAACTGATCGGTGTGCGCCGCAGCGGCGATCAC
CTGGTCGCGCTGCGCGAGCGGGAGCTACGCCGCCAACGCGCTCGGATCGGTTTCGTCTTCCAGCAGTTCAATCTGTTCCC
CCACCTGACCGCTCTGGAGAACATCGCCCGGCCGCAGCGACTCACTCTGCGGCGTGGCCGCCAGGAGGCACTGTCGCGAG
CGCGCACGCTGTTGGATCGGGTGGGCTTGGCGCGACACGCCGACCACTACCCCGGTCAGCTCTCCGGTGGACAACAGCAA
CGCGTCGCGATCGCACGCACCCTGGCTCTTGACCCTGATCTGATCCTGTTCGACGAGCCCACGTCGGCGCTCGACCCCGA
GCTGGTCGGCGAGGTCAACGCCGTCATCACCGAACTCGCCGCCGAGGGCCGCACCCTCGTCGTCGTCACTCACGAGTTGG
CCTTCGCTCGCCGGATCGCCGACCGGATCCTGTTCCTCGATCAGGGGCGAGTCGTGGCGGCGGGGCCGCCGGCCGCAGTC
CTCGATCACCCTGCCACCGACCGCACCCGCGCCTTTCTCACGCACTGGAACTCCAAGGAGACAGCATGA

Protein sequence :
MTAPTPPRLEAVGLSKTFGHDQVLRGVDLTVAPGEVVSIIGPSGSGKSTLLRLLNHLEEPTAGVVRLDGELIGVRRSGDH
LVALRERELRRQRARIGFVFQQFNLFPHLTALENIARPQRLTLRRGRQEALSRARTLLDRVGLARHADHYPGQLSGGQQQ
RVAIARTLALDPDLILFDEPTSALDPELVGEVNAVITELAAEGRTLVVVTHELAFARRIADRILFLDQGRVVAAGPPAAV
LDHPATDRTRAFLTHWNSKETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_2051 YP_003647002.1 ABC transporter NC_008702.1.4606598. Protein 3e-26 45
Tpau_2051 YP_003647002.1 ABC transporter NC_012469.1.7686878. Protein 8e-28 42