|
Name : Tpau_1947 (Tpau_1947) Accession : YP_003646898.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 2033291 - 2034664 bp Length : 1374 bp Strand : - Note : PFAM: integrase; KEGG: cms:CMS_2918 insertion element ISCmi3 transposase DNA sequence : GTGCATTCACCGATGGTGAAGAAGAGGTTCTTCAAGGAATTGGACGTGTCTGACGGCAATGTGTCGGTCGCTGCTAGGGC GGCGGGGGTGACAGTGAATACGGCGTTTGGATGGATGCGCAGGGCGGGCCTGCGTGGACGTGGGAGCACTAGCAATGGTG GTCATCCCGGCCGGGCCGAGTACGACCGGCTTCGCCGTGAGGGGGTGCTGCGGCCGGACGCTGCTCGGCGTGTCGGTGTC AGCGTTCGCACTGCTGGGGACTGGGATCGAGGGGTGCGCAAGATTGGCGATACTCGTATCCATCCCGACGGACGCAAGAT CGATTACCTGACAGGTGCGGTCACGTGGGTCGGAGTGGAATCGGATGCACCGAGGCAGCGGAGCCTGCATCCACGGTTTC TGACCTTGACCGAGCGGGAAACTATCGCTGACATGCGCCGCGAGGGGGCATCGCTGCGGGCCATCGGCAGGGAGCTCGGC CGGCCAGCATCGACGATCAAACGGGAGATCGACGCTGGCGTTGTCAACGGTGCCTATCGCCCGCATCAGGCGCACCGCAG GTGGGAAAAGAGCCGGTCACGGCCGAAGCCAGCGAAACTGGCCCAGGCCGGTCCGCTGCGGGACTACGTCGAGAACAAAC TGCAGGACCAGTGGTCCCCAGAGCAGATATGTCACTCTCTAGTGACCGAGTTCCCCAACGAGCAAAGTATGCGTGTGAGC GTCGAGACGATCTACCAGTCGATCTACGTTCAGGCTCGGGGCGGCCTGCGCCGTGAAGTCGCGATGGCCTTGCGAACGGG CCGCACCCGCCGCAAGCCCCACCGCCGCGCCGAACATCGCACCAGACGATTCGTCGACAAGATGGTGATGATCTCCGACC GGCCCGCCGAGGTCGAGGATCGAGCCGTGCCAGGCCACTGGGAAGGTGACCTGATCGTCGGTACTCGCAGCGAGTCCGCG ATCGTCACACTCGTCGAACGCTCCACCCGCTACGTCATGCTCGGCCACCTGCCTGGCGGCCACTCCGCCGAAGAAGTCCG TGACGTGCTGGTTTCGTTGATCGGAAATCTCCCAGGACATTTGCGGGGATCACTGACCTGGGACCAGGGCTGCGAGATGG CCGCCCACCAACAATTCACGGTCGCCACCGGGGTTCCGGTCTACTTCTGCGATCCCCACTCACCCTGGCAGCGCGGAAGC AACGAGAACACCAATGGACTACTGCGCCAGTACTTCCCGAAAGGCACCGACCTGAGCGCCTACGGCCGCGAAGACCTCGA ACTCGTCGCCCAGAAACTCAATCGCCGACCACGCAAAACGCTCGGCTGGAAGACACCAGCCGAGCGTTTGCGTGACCTCA TTACAGCTCGCTAG Protein sequence : MHSPMVKKRFFKELDVSDGNVSVAARAAGVTVNTAFGWMRRAGLRGRGSTSNGGHPGRAEYDRLRREGVLRPDAARRVGV SVRTAGDWDRGVRKIGDTRIHPDGRKIDYLTGAVTWVGVESDAPRQRSLHPRFLTLTERETIADMRREGASLRAIGRELG RPASTIKREIDAGVVNGAYRPHQAHRRWEKSRSRPKPAKLAQAGPLRDYVENKLQDQWSPEQICHSLVTEFPNEQSMRVS VETIYQSIYVQARGGLRREVAMALRTGRTRRKPHRRAEHRTRRFVDKMVMISDRPAEVEDRAVPGHWEGDLIVGTRSESA IVTLVERSTRYVMLGHLPGGHSAEEVRDVLVSLIGNLPGHLRGSLTWDQGCEMAAHQQFTVATGVPVYFCDPHSPWQRGS NENTNGLLRQYFPKGTDLSAYGREDLELVAQKLNRRPRKTLGWKTPAERLRDLITAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDC7B_2059 | YP_005163500.1 | transposase-like protein | Not tested | Not named | Protein | 2e-62 | 45 |
| CDC7B_2034 | YP_005163475.1 | transposase-like protein | Not tested | Not named | Protein | 3e-62 | 44 |
| DIP0764 | NP_939135.1 | transposase | Not tested | Not named | Protein | 1e-62 | 44 |
