Gene Information

Name : Tpau_1926 (Tpau_1926)
Accession : YP_003646878.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2009173 - 2010078 bp
Length : 906 bp
Strand : +
Note : KEGG: rop:ROP_68630 pyridoxal phosphate synthase component Pdx1; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence :
GTGACCACTGATCCCCAGACCGCACCCGTCACCGGCACCGCACGCGTCAAGCGCGGCATGGCCGAGATGCTCAAGGGCGG
CGTGATCATGGACGTGGTCACCCCCGAGCAGGCCAAGATCGCCGAGGACGCCGGGGCCGTGGCCGTCATGGCCCTGGAGC
GCGTGCCCGCCGACATCCGCGCGCAGGGCGGCGTGAGCCGCATGTCCGACCCCGACATGATCGACGGCATCATCTCCGCC
GTCTCGATCCCGGTGATGGCCAAGGCCCGCATCGGCCACTTCGTCGAGGCGCAGATCCTGCAGGCCCTCGGCGTCGATTA
CATCGATGAGTCCGAGGTCCTGACCCCGGCCGACTACGCCAATCACATCGACAAGTTCGCCTTCACGGTGCCGTTCGTCT
GCGGCGCGACCAACCTCGGCGAGGCCCTGCGCCGCATCACCGAGGGCGCCGCGATGATCCGCAGCAAGGGCGAGGCCGGG
ACCGGCGACGTCTCCAACGCCACCACGCACATGCGCAAGATCCGCGACGAGATCCGTCGCCTCACCTCGCTGCCCGAGGA
CGAGCTGTACGTGGCGGCCAAGGAACTGCAGGCTCCGTACGACCTCGTCGTCGAGGTCGCCAAGAACGGCAAGCTGCCCG
TCACCCTGTTCACCGCGGGCGGCATTGCGACACCCGCCGATGCGGCCATGATGATGCAGCTCGGCGCCGAGGGCGTGTTC
GTGGGTTCGGGCATCTTCAAGTCGGGCAACCCGGAGCAGCGCGCGAAGGCGATCGTCGCCGCGACCACCTTCTACGACGA
CCCCGGCAAGCTCGCCGAGGTCTCCCGTGGGCTGGGCGAGGCGATGGTCGGCATCAACGTCGACGACATCCCGCAGCCGC
ACCGCCTGGCGGAACGCGGCTGGTGA

Protein sequence :
MTTDPQTAPVTGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIISA
VSIPVMAKARIGHFVEAQILQALGVDYIDESEVLTPADYANHIDKFAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAG
TGDVSNATTHMRKIRDEIRRLTSLPEDELYVAAKELQAPYDLVVEVAKNGKLPVTLFTAGGIATPADAAMMMQLGAEGVF
VGSGIFKSGNPEQRAKAIVAATTFYDDPGKLAEVSRGLGEAMVGINVDDIPQPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-115 83
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-115 83
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-115 83