|
Name : Tpau_1874 (Tpau_1874) Accession : YP_003646826.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Virulence Product : LuxR family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 1961286 - 1961927 bp Length : 642 bp Strand : - Note : KEGG: bcv:Bcav_0335 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR DNA sequence : GTGACGGTCACCGTGGTCCTGGCCGACGATCACGCCGCGATCCGAGCGGGCCTGCGTCTGCTGCTCGAGTCGTCCGGTGA GGTGGAGGTGATCGGAGAGGCGGCCGACGGGGCCGCCGCCCTGCGGCAGGCGAAGGCGTTGCGGCCCGATGTGGTGATCA TGGACGTACGGATGCCGCGAGTGGACGGCATCGCCGCGACCGCGCATGTGGTGGCGGAGACCGATGCGGCCGTGCTGGTG CTCACCACCTTCGATCTGGACGACTACGTCCTGGGCGCGCTCGCGGCGGGAGCGAGCGGCTTCCTGCTCAAGTCCGCGGG CGGCGACGAGCTGATCCGCGGCGTGCAGGCGGTTGCCGCCGGCGATGCGGTGCTCGACCCGAAGGTCACCCGCGCTGTGA TCACCTCCCTGCCTGCGCCACCGACTGCGGTGCACCCGGACCTGTCCTCACTCACCGGCCGGGAGCGAGATGTATTGGCG GGGCTGGGCGCCGGCCTGTCGAACTATCAGATCGCACGCCGACTCGAGATCGGCGAGGCAACCGTGAAGACACACGTCTC GCGGGTGCTGATGAAGCTCGGTGTGCAGTCCCGGGTGCAGGCCGCGGTGATCGCGGCGCAGTCGGGCCTCGAAGCACCGT GA Protein sequence : MTVTVVLADDHAAIRAGLRLLLESSGEVEVIGEAADGAAALRQAKALRPDVVIMDVRMPRVDGIAATAHVVAETDAAVLV LTTFDLDDYVLGALAAGASGFLLKSAGGDELIRGVQAVAAGDAVLDPKVTRAVITSLPAPPTAVHPDLSSLTGRERDVLA GLGAGLSNYQIARRLEIGEATVKTHVSRVLMKLGVQSRVQAAVIAAQSGLEAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| regB | YP_001220830.1 | putative two-component system response regulator | Not tested | chp/tomA region | Protein | 2e-25 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tpau_1874 | YP_003646826.1 | LuxR family transcriptional regulator | VFG1824 | Protein | 9e-25 | 43 |
