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Name : Tpau_1737 (Tpau_1737) Accession : YP_003646694.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1808615 - 1811977 bp Length : 3363 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; KEGG: krh:KRH_21510 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); protein of unknown function DUF472; protein of unknown function DUF471; protein of unknown function DUF470; nucleic acid binding OB-fold DNA sequence : ATGCAGCAGAGCGTCCGCGAGCGGACCACCGAGGCGACTGCCACCTGGCTGGCCCGGACGATGTTCTTCGCCGCCATCGT CTCACTGCTGGGCGCGCTGGTCCACGGCGACCGCATCCTGCCGATCCTCGCCGATGTGCTGGGCGTGCTCGGCATCCCCT CGTTCCCCAGCCTGCTGTTCGTCGCGCTGCTGACGGTGCTTAGCGGGGCGCTGCGCCGGCGGCTCCGGGCCGCGCACACC GTGGCCTGCGCTCTCATGGCCACGGAGGTCGCGGCGAACATTTTCGTCCTGGTGCTCGTGGTCACCGAGGAGCTCGGCGA CGACGACGGCAGCGCCCGCGTGCCGGCCCTGCTGGCGAACTACTTCGAGGCCCGCTACTCGTTGCCGGGCGCGGCCTTCG CGGCTGCGGTGAGCGCGGCGACGCTCGCCCTGGTCATCGCCGCCCGGCCCGCCTTCCCCGCGAAGCTGGCCCACGGGTCC CGCCGCGCGGCGCTCGGCGTCCTGGTGGGCGGGCTACTGCTGTCGTACCTGGTCACGCTGGCGCTCACGTTCACCTTCCC GGGCCGGCTACGCGGTCCGGTCGAGATCGCGGTGTGGGCGCTGCGCTCGACCTTCGGCGTCTCACTCCCCCGCCCGCTGG ACCTGCTGCTCAACGGTCACTCCGGCCCGCAGTGGATCTACTCCTTCGCCGGCATCATGTCGGCGACGGTGCTGATCCTG GCGCTGATGGCGTTCTGGCGCGCCGGTCGCGGCGACGAGCTGATGACCGAACCGGAGGAACTGGAGGTGCGCCGCCTGCT GCTCACCTACGGCGAGGACGATTCACTGGGCTACTTCGCCACCCGGCGCGATAAGTCGGTGATCGCGGCTCCCGATCGCA GAGCGGTGGTCACCAGCCGGGTGGTGGGCCCGGTGTCGATGGCGAGCGCCGATCCGATCGGCGACCGCGAGTCGTGGCCC GCCGCCGTGCACGCCTGGCTGGAGGACTGCCGCCGACACAGCCTGTACCCGGCGGTCCTTGCGGCGAGCATCGACGGTGC CGCGGTGTACGAGGCTGCCGGGCTGCGGACACTCAACATCGGCGACGAGGCGATCATCCACGTCGATCGGTTCACGCTCA AGGGGCGCGAGATGCGTGCGGTACGGCAAGCCGTCACCCGCGTGAGCGGCGCCGGGTACACGCTGCAGGTGCGCCGCCAC GCGGACCTCACCACCGAGGAGCTGACGCAGGTCGCACAGCTCGCGGAGAAGTGGCGCGGCGAGGAGACCGAGCGCGGCTT CTCCATGGCCCTCAACCGGATCGGCGACCCGGTGGACGGTCGGTGCGTGCTGGTGACCGCGCACGACGCCGCCGGCGAGG TGCGCGGTCTTTTGAGCTTCGTGCCCTGGGGCACCCGCGGCCTCTCGCTCGATCTGATGCGTCGCGACCGGAACGCGGAG AACGGGCTCAACGAGTTCATGGTGGCCAAACTCGTCGAGGCCAGCGCGGAGATCGGCATCCGTCGCATCTCCTTGAACTT CGCCGTTTTCCGCGCTGTCTTCTTCGAAGCAGACCGGGTGGGCGCGGGGCCCGTCACCCGGATGGTGGATTCGGTGCTCA GCTTCGCGTCGAAGTTCTATCAGTTGGAAACGTTGTATCGGTCGAACGACAAGTACCGACCGGACTGGGTGCCTCGGATC CTGTGCTACGACCCGACGCTCACCGCGGTGCGAGCCGGTATCGCGGTGGGAACCGCCGAGGGCTTTCTGCCGCAGATCGG GCCGAAGTTCCTCTCCGGCCCCACTGTTCCCGACGAGCAGGATCAGCGCGACCCAGAATTCGTCGTGCGCCTCCTCGCCG AGGAGGAGCGCCTACTGCACCGCGAGGCGCCCGCACCACGGCTTTCCGAACAGCAGCGGGTGCGTCGCCGCAAACTCACG GCGATGGAGGCGGCGGGGATGCCCGGCTATCCCCCCTCGGTGCCGCGCACCGCCTCGCTCGCCGAGGTTCGCGGGCACCT CAATGGCCTGGCCCCCGATTCATCGACGGACACCGTTGTTTCCGTGACCGGCAGGGTGCGTGGCGTGCGTGACTACGGTG GCGTCACCTTCGTCGATCTTCACGAGGACAGGGCCACCTTGCAGGTGATCGCCGAGCGCGGTCGTACTCCCGACGACGTG CGCGCCTTCTGGCGCGAGTCGATCGACATGGGCGACCTGGTGTCGGTGACCGGTGAGATGGTCACTTCGCACACGGGTGA GCTCTCGGTTCTGCTCCAGGACTGGGCCATGGCCGGGAAGTGCCTCTCACCGGTCCCGAAGCCGCGGGTGCGACTCGGCG ACGAGACCAGGGCGCGCAGCCGCTCCCTCGACCTGATGACCGATGACGGTGCTGTCGACCTGCTCTACCGCCGCTCGCGG GCGGTCGCGGCAATGCGCGCCGCGTTCACCGATCGCGGCTTCACCGAGGTCGAGACGCCGATGCTGCAGTCGGTGCACGG CGGCGCGGCGGCACGCCCGTTCACCACGCACATCAACGCCTACGACATGGATCTGTACCTCCGGATCGCGCCGGAGCTCT ACCTCAAGCGGCTCGCGGTGGGAGGCATGGGCCGGATCTTCGAGATCAACCGGAACTTCCGCAACGAGGGCGCCGACGCC ACCCACAACCCGGAGTTCACCTCGCTCGAGGCCTACGAGGCGTACGGCGACTACACCACCATGCGAACACTGACCCGCGA GGTGATCCTCGGCGCCGCGATCGCCGTCAACGGCCGGCCGATCGCGGTACGGCCCGACGGTTCCGGTGGAACACGCGAGG TGGACCTCACCGCCGAATGGCCGGTGATCACGGTGCACGAGGCTGTTTCCCGGGCCGTCGGCACGTCGGTGACACCCGAC AGCGAGGTCGAGGAGTTGGAGGCGCTGTGCAAGCAGTGGCACGTCGCGGCTCCCCGGGGAGCGTCGGCGGGCAAGCTGGT CATGGAACTGTACGAGGGGCTGGTGGAAAAGCAGACCGAGTTCCCCACGTTCTACTGCGATTTCCCGATCGAGGTCTCGC CACTGGCGCGCAGACACCGCCGCGATCCGCGACTCACGGAACAATGGGACCTGGTGGGTTTCGGCGCCGAGCTGGGTACT GCCTACACGGAACTGACCGATCCGATCGATCAGCGCGAGCGGCTCACCCAGCAGTCGATGGCCGCGGCCGCCGGTGATCC GGAGGCGATGGAACTCGATGAGTCCTTCCTGGATGCCCTGTCGTACGCCATGCCACCGACCGGCGGTCTCGGCATCGGTG TGGACCGGATCATCATGCTGCTTGCGGGAGTGAACATCCGCGCCACGCTGGCCTTCCCGTTCATCAAACCCCAGGACCGC TGA Protein sequence : MQQSVRERTTEATATWLARTMFFAAIVSLLGALVHGDRILPILADVLGVLGIPSFPSLLFVALLTVLSGALRRRLRAAHT VACALMATEVAANIFVLVLVVTEELGDDDGSARVPALLANYFEARYSLPGAAFAAAVSAATLALVIAARPAFPAKLAHGS RRAALGVLVGGLLLSYLVTLALTFTFPGRLRGPVEIAVWALRSTFGVSLPRPLDLLLNGHSGPQWIYSFAGIMSATVLIL ALMAFWRAGRGDELMTEPEELEVRRLLLTYGEDDSLGYFATRRDKSVIAAPDRRAVVTSRVVGPVSMASADPIGDRESWP AAVHAWLEDCRRHSLYPAVLAASIDGAAVYEAAGLRTLNIGDEAIIHVDRFTLKGREMRAVRQAVTRVSGAGYTLQVRRH ADLTTEELTQVAQLAEKWRGEETERGFSMALNRIGDPVDGRCVLVTAHDAAGEVRGLLSFVPWGTRGLSLDLMRRDRNAE NGLNEFMVAKLVEASAEIGIRRISLNFAVFRAVFFEADRVGAGPVTRMVDSVLSFASKFYQLETLYRSNDKYRPDWVPRI LCYDPTLTAVRAGIAVGTAEGFLPQIGPKFLSGPTVPDEQDQRDPEFVVRLLAEEERLLHREAPAPRLSEQQRVRRRKLT AMEAAGMPGYPPSVPRTASLAEVRGHLNGLAPDSSTDTVVSVTGRVRGVRDYGGVTFVDLHEDRATLQVIAERGRTPDDV RAFWRESIDMGDLVSVTGEMVTSHTGELSVLLQDWAMAGKCLSPVPKPRVRLGDETRARSRSLDLMTDDGAVDLLYRRSR AVAAMRAAFTDRGFTEVETPMLQSVHGGAAARPFTTHINAYDMDLYLRIAPELYLKRLAVGGMGRIFEINRNFRNEGADA THNPEFTSLEAYEAYGDYTTMRTLTREVILGAAIAVNGRPIAVRPDGSGGTREVDLTAEWPVITVHEAVSRAVGTSVTPD SEVEELEALCKQWHVAAPRGASAGKLVMELYEGLVEKQTEFPTFYCDFPIEVSPLARRHRRDPRLTEQWDLVGFGAELGT AYTELTDPIDQRERLTQQSMAAAAGDPEAMELDESFLDALSYAMPPTGGLGIGVDRIIMLLAGVNIRATLAFPFIKPQDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-170 | 48 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-170 | 48 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-170 | 48 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-170 | 48 |
