Gene Information

Name : Tpau_1510 (Tpau_1510)
Accession : YP_003646473.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1579439 - 1580872 bp
Length : 1434 bp
Strand : -
Note : KEGG: mab:MAB_1933c glutamine synthetase (GlnA1); TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp

DNA sequence :
GTGTTCACTACCAAAGAGGAACTTCTCGACTACCTCAAGAAGGAGAACGTCGAGTACGTCGACATCCGCTTCTGCGACCT
GCCGGGCACGATGCAGCACTTCAGCATCCCCGCATCGGCGTTCGACGAGAGCGTCTTCGAGGATGGCCTGGCGTTCGACG
GCTCGTCGATCCGCGGCTTCCAGTCGATCGATGAGTCCGACATGATGCTGCTCCCCGACGTCACCACGGCGCGGATCGAC
CCGTTCCGGGCGGCGAAGACCCTGAACGTCTCGTTCTTCGTCCACGACCCGTTCACCCGCGAGGCCTACAGCCGCGACCC
GCGCAACATCGCGCGCAAGGCCGAGGAGTACCTCGTCAGCACCGGCATCGCCGACACCTGCTTCTTCGGCGCCGAGGCCG
AGTTCTACATCTTCGACTCCGTGTCGTACGACTCCAGCATCAACGGATCGTTCTACGAGGTGGACTCGATCTCGGGTTCG
TGGAACACGGGCCGCGCCCTCGAGGAGGACGGCTCCCCGAACCTCGGCTACAAGGTGCGGGGCAAGGGAGGCTACTTCCC
GGTTGCACCGTACGACCACTACGTCGACCTGCGCGACAAGATCTCGACGAATCTGCAGAACGCCGGTTTCACCCTGGAGC
GCGGCCACCACGAGGTGGGCACCGGCGGCCAGGCCGAGATCAACTACAAGTTCGACACGCTGCTGCACGCGGCCGACGAT
GTTCAGCTGTTCAAGTACATCGTGAAGAACACCGCGTGGCAGGAGGGCAAGACCGTCACGTTCATGCCGAAGCCGCTGTT
CGGCGACAACGGTTCGGGCATGCACGCGCATCAGTCGCTGTGGAAGGACGGCAAGCCGCTGTTCTACGACGAGGCCGGCT
ACGGTGGCCTGTCGGACATCGCGCGCTACTACATCGGTGGCATCCTGCATCACGCCCCGTCGCTGCTCGCCTTCACCAAC
CCGACGATCAACTCGTACAAGCGCCTGGTGCCGGGTTACGAGGCCCCGATCAACCTGGTGTACAGCCAGCGCAACCGCTC
GGCCTGTGTGCGTATCCCGATCACGGGGAACAACCCGAAGGCCAAGCGCATCGAGTTCCGCTGCCCGGACTCGTCGGGCA
ACCCGTACCTGGCCTTCGCCGCCATGATGATGGCCGGCCTGGACGGCATCAAGAACAAGATCGAGCCGCACGCCCCGGTC
GACAAGGACCTCTACGAGCTGCCGCCCGAGGAGGCCAAGGGCATCCCGCAGGCCCCCACCTCGCTCCCCGCCGTGATCGA
CCGTCTCGAGGAGGACCACGAGTACCTCACCGCCGGCGGTGTGTTCACCGAGGACCTGATCGAGGAGTGGGTCTCGTACA
AGCGTGAGAACGAGATCGAGCCGGTCAACCTGCGCCCGCACCCGTACGAGTTCCAGCTCTACTACGACGTGTAA

Protein sequence :
MFTTKEELLDYLKKENVEYVDIRFCDLPGTMQHFSIPASAFDESVFEDGLAFDGSSIRGFQSIDESDMMLLPDVTTARID
PFRAAKTLNVSFFVHDPFTREAYSRDPRNIARKAEEYLVSTGIADTCFFGAEAEFYIFDSVSYDSSINGSFYEVDSISGS
WNTGRALEEDGSPNLGYKVRGKGGYFPVAPYDHYVDLRDKISTNLQNAGFTLERGHHEVGTGGQAEINYKFDTLLHAADD
VQLFKYIVKNTAWQEGKTVTFMPKPLFGDNGSGMHAHQSLWKDGKPLFYDEAGYGGLSDIARYYIGGILHHAPSLLAFTN
PTINSYKRLVPGYEAPINLVYSQRNRSACVRIPITGNNPKAKRIEFRCPDSSGNPYLAFAAMMMAGLDGIKNKIEPHAPV
DKDLYELPPEEAKGIPQAPTSLPAVIDRLEEDHEYLTAGGVFTEDLIEEWVSYKRENEIEPVNLRPHPYEFQLYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-92 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_1510 YP_003646473.1 glutamine synthetase VFG1399 Protein 0.0 83