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Name : Tpau_0149 (Tpau_0149) Accession : YP_003645142.1 Strain : Tsukamurella paurometabola DSM 20162 Genome accession: NC_014158 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 153319 - 154572 bp Length : 1254 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: mab:MAB_0153 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : GTGATCGACGTCAAGCTGCTCCGCGAGAATCCGGACCTCGTGCGCGCCTCGCAGCGCGCCCGTGGTGAAGACGCCGCGTT GGTGGACGCCCTGCTGGAGGCCGACGCGCACCGTCGCGCCGCTGTCCTGGCGGCCGACAACCTGCGTGCCGAGCACAAGA CGTCCTCCAAGTCGATCGGCAAAGCCGCACCCGAGGAGCGCCCCGCGCTCGTCGCGGCGGCCGGCGAGCTGGCGGCGAAG GTCAAGGAGGCGGAGGCCGAGCAGGCTCGCGCCGACGAAGTCTTCGACGAGACGGCACGCAAGATCGGCAATGTGATCAT CGAGGGCGTGCCCGCCGGCGGCGAGGACGATTTCGAGGTGCTCGAGCACGTGGGCACGATCCCCGAGATCACCGACCCCA AAGACCATCTCGAGCTCGCCGAGGGGCTGGGACTGCTCGATATGGAGCGCGGCGCGAAGGTCTCGGGCTCGCGGTTCTAC TTCATGACCGGTCACGGCGCGCTGTTCCAGATGGCGCTGCTGCAACTCGCCGTGCAGAAGGCCGTGGCGCACGGCTTCAC GCTGATGATCCCGCCGGTACTGGTGAAGCCGGAGATCATGGGCGGCACCGGCTTCCTGGGTGCGCACGCCGACGAGATCT ACCGGCTCGAGGCCGACGACCTGTACCTCGTGGGCACCTCGGAGGTTCCGCTGGCGGGGTACCACATGGGCGAGATCATC GATCTGAACGATGGTCCGATTCGTTATGCGGCGCAGTCGAGTTGCTTCCGCCGCGAGGCGGGTTCGTACGGCAAGGACAC CCGCGGCATCATCCGGGTGCACCAGTTCGACAAGATCGAGATGTTCGTCTACTGCAAGCCCGAGGATGCCGAGGCCGAGC ACCAGCGGCTGCTCGATTTCGAGAAGGAGATGCTGGCCGCCGTCGAGGTGCCCTACCGGGTGATCGACGTGGCCGCAGGC GATCTCGGCAGCTCCGCCGCGCGCAAGTTCGACTGCGAGGCGTGGGTGCCGTCGCAGGAGCGCTACCGCGAGCTCACGTC GACCTCGAACTGCACCACCTTCCAGGCCCGCCGCCTCGGCGTGCGGTACCGGGACGAGGACGGTCGGCCGCAGATCGCCG CCACGCTCAACGGCACGCTGGCCACCACGCGCTGGCTCGTCGCGATCTGGGAGAACCACCAGCAGCCCGACGGTTCCGTG CGGGTCCCCGCCGCCCTGCAGCCGTTCCTCGGCACGGACGTCCTGCGCCCGTAA Protein sequence : MIDVKLLRENPDLVRASQRARGEDAALVDALLEADAHRRAAVLAADNLRAEHKTSSKSIGKAAPEERPALVAAAGELAAK VKEAEAEQARADEVFDETARKIGNVIIEGVPAGGEDDFEVLEHVGTIPEITDPKDHLELAEGLGLLDMERGAKVSGSRFY FMTGHGALFQMALLQLAVQKAVAHGFTLMIPPVLVKPEIMGGTGFLGAHADEIYRLEADDLYLVGTSEVPLAGYHMGEII DLNDGPIRYAAQSSCFRREAGSYGKDTRGIIRVHQFDKIEMFVYCKPEDAEAEHQRLLDFEKEMLAAVEVPYRVIDVAAG DLGSSAARKFDCEAWVPSQERYRELTSTSNCTTFQARRLGVRYRDEDGRPQIAATLNGTLATTRWLVAIWENHQQPDGSV RVPAALQPFLGTDVLRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-53 | 42 |
