Gene Information

Name : Tpau_1451 (Tpau_1451)
Accession : YP_003646417.1
Strain : Tsukamurella paurometabola DSM 20162
Genome accession: NC_014158
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1515933 - 1516709 bp
Length : 777 bp
Strand : +
Note : KEGG: cai:Caci_8853 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGAGCATCGAGATCGATTCCCTCGCTGTGCAGCTCGACGGCCGTCCGGTGCTGCGCGGGGTCACGCTCGGTGCCTCGTC
GGGGGAGTGGACCGCGGTGATCGGGCCCAATGGGGCAGGGAAGTCGACGTTACTGCGGGCCGCGCTCGGCCTGGTCCCGA
GGCAGGGGCGGGTCACCGTCGACGGTGCCGATCTGCGTGGGCTCGCCCCGCGCAAGCGGGCCCGGTTGATCGCGTACGCG
CCGCAGTCGCCGAATCTGCCCCCGGGTATGACAGTGCGCGAATACGCCCTTCTCGGACGTTCGCCGTATATTCCGTACCT
CGGTCGCGAGGGTGCGAAGGACCGCCGGATCGTGGCAGACGTACTTGATCGATTGGAACTGGGCGACTTCGCCTCCCGGG
ATCTGGACCGACTATCGGGTGGCGAGCGGCAACGGGTCGTCCTGGCTCGCGCCATCGCTCAGCAGGCGCCGGTGCTGCTG
CTCGACGAGCCCACCACGGCCCTCGACATCGGTCATCAGCAGCAGACGATGGAATTGCTCGACACGCTGCGCCGTGACGA
TGGTCTCACCGTGGTCACCGCTATTCACGATCTGACCTTGGCGGGACAGTATGCAGATCGGTTGGTGCTGTTGGCATCCG
GGAAGGTCGCGGCCTCCGGCGGGGCTTCGGAGGTGTTGACCGCCGCACTGATCGCAGAGCACTTCGGTGCCCGTGTGCAC
GTCACGACGGGGCCGGACGGACGGCCGATCCTCGGCTTGGAGCGTCCGAGCACCTAG

Protein sequence : 
MSIEIDSLAVQLDGRPVLRGVTLGASSGEWTAVIGPNGAGKSTLLRAALGLVPRQGRVTVDGADLRGLAPRKRARLIAYA
PQSPNLPPGMTVREYALLGRSPYIPYLGREGAKDRRIVADVLDRLELGDFASRDLDRLSGGERQRVVLARAIAQQAPVLL
LDEPTTALDIGHQQQTMELLDTLRRDDGLTVVTAIHDLTLAGQYADRLVLLASGKVAASGGASEVLTAALIAEHFGARVH
VTTGPDGRPILGLERPST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-26 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_1451 YP_003646417.1 ABC transporter BAC0164 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpau_1451 YP_003646417.1 ABC transporter VFG1042 Protein 2e-26 41