Gene Information

Name : Tint_0679 (Tint_0679)
Accession : YP_003642408.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 737931 - 738707 bp
Length : 777 bp
Strand : -
Note : KEGG: vap:Vapar_2384 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCGCCTGCTCCTGGTTGAAGATGATGTGATGATCGGCGAAAGCGTGCTCGACGCCTTGCGCGGCGAGGGCTACGCAGT
GGACTGGGTGCGCGACGGCGCCGTGGCCGACTCGGCGCTGCGCACCGAGCAATACGACCTGGTGCTGCTCGATCTGGGCC
TGCCCAAGATGGACGGCATCGCCGTACTCAAGGCGCTGCGCACCCGGCGCGAAACCACCCCGGTGCTCATCGCCACCGCG
CGCGACGCCGTCTCGGCGCGCATCGCCGGGCTCGACGCCGGAGCCGACGACTATGTGCTCAAACCCTACGACCTCGACGA
ACTCTCCGCCCGCATCCGCGCGCTGCTGCGCCGGGCGGCGGGGCGGGCCGAGCCGGTGTTCAGCTACGGCCGCATCAGCC
TGAACCCGGCCACGCACGAAGCCCTGCTCGACGGCGAGCCAGTCGCCCTGTCGCAGCGCGAGTGGGCCGTGCTCGAAGCG
CTGATCGCCCGCCCCGGCATGATTCTGTCGCGCGCCCAGCTCGAAGAAAAACTCTATAGCTGGAAGGACGAGATTTCGAG
CAACGCGGTGGAGGTGTACGTTCACAGCCTGCGCAAAAAGCTGGGGCCCGACCTCATCCGCAACATCCGCGGTATGGGCT
ACATGATCGCCAAGGAGCCCGCGCCTGCAAGCCCGAGCCGTGATGGCGGCGGTGACGGCCGCCACACGCCAGAAGCCGAT
AGCGTTGACGATGGCGGAGATGGCGGAGATGGCGGCGGCGATGGGGGCGGCGATTGA

Protein sequence : 
MRLLLVEDDVMIGESVLDALRGEGYAVDWVRDGAVADSALRTEQYDLVLLDLGLPKMDGIAVLKALRTRRETTPVLIATA
RDAVSARIAGLDAGADDYVLKPYDLDELSARIRALLRRAAGRAEPVFSYGRISLNPATHEALLDGEPVALSQREWAVLEA
LIARPGMILSRAQLEEKLYSWKDEISSNAVEVYVHSLRKKLGPDLIRNIRGMGYMIAKEPAPASPSRDGGGDGRHTPEAD
SVDDGGDGGDGGGDGGGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_0679 YP_003642408.1 winged helix family two component transcriptional regulator BAC0487 Protein 1e-35 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_0679 YP_003642408.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-36 44