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Name : Tint_0409 (Tint_0409) Accession : YP_003642149.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 437041 - 438561 bp Length : 1521 bp Strand : - Note : KEGG: reu:Reut_A1070 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGAATACTGACGCCCCCCATCCGCCCGCCGCTGACGACAGCCACCTCATCGCGGAGCGCCGCGCCAAACTCGCCGCGTT GCGCGAGGTCGGCCCGGCGTTCCCCAACGACTTCAAGCCTGCGCATCAGGCCATGAGTCTGCAGGCGCAACATGGGGGCG ACGAGCCCGACGCGCTCGAAGCGGCTGGCGTGCGGGTGCGCGTGGCGGGCCGCATGATGCTCAAGCGCGTGATGGGCAAG GCCAGTTTTGCCACTTTGCAGGACGGTACGGGGCGCATTCAGATCCACGTTTCCAACGATGTCACTGGCGAAGAGGCCCA TGCGGCCTTCAAACACTACGACTTGGGCGACTGGATCGGTTGCGAGGGCGTGCTGTTCAAAACGCGCACCGGTGAGCTCA CCATTCGGGCCGAGCAGGTGCGCCTGCTGGTCAAGTCGCTGCGCCCCCTGCCCGACAAGTTTCACGGCCTCGAAGATGTG GAAACGCGCTACCGCCAGCGTTATGTCGATCTCATCGTCACACCAGAATCGCGCGAACGCTTCGCGCTGCGCAGCAAGGC CATCGCGGCGCTGCGCAACGAAATGCTGGCAGCGGGCTTTATGGAGGTGGAAACGCCCATGCTGCACCCCATTCCGGGGG GTGCTGCGGCCAAACCGTTCATCACGCACCACAACGCGCTCGATCAGCAGATGTATCTGCGCATCGCGCCCGAGCTTTAC CTCAAGCGCCTGCTGGTCGGCGGCTTCGAGCGGGTGTTCGAGATCAACCGCAACTTCCGCAACGAAGGTCTGAGCCCGCG GCACAACCCCGAGTTCACCATGATGGAGTTTTACGCCGCTTGGTGGACCTACCGCGACCAGATGGATTTCACCGAGGCGC TCATTCGCAACACCGCGCAACTCACCTGCGGCACCGCGGTGCTCACCCACCAAGGGCGCACGCTGGACTTGAGCGCGCCG TTTGCTCGGCTGACCTTGACGCAGGCCATCCAGAAACACGCTCCCGACTACACCGACGCGCAATTGGCCGATGACGGCTT TTTACGCGGCGAGTTGCGCCGTCTCGACGCCGATCATGCGCCGCACAAACTCAAGGGCATGGGGCTGGGCGCCTTGCAAC TCGCGCTGTTTGAACAAGTCGCCGAGCATCTGCTGTGGGAGCCGACCTTCATTGTCGACTATCCCGTGGAAGTGTCGCCC CTGGCCCGCGCCTCCGATGCCGATGCGAATACGACCGAGCGCTTCGAGCTGTTCATCACCGGCCGCGAAATCGCCAACGG CTTCTCCGAGCTGAACGACCCCGAAGACCAGGCCGCCCGCTTTCAGTCGCAAGTGCAGGCCAAGGAAGCCGGCGACGACG AAGCCATGTATTTCGACGCCGATTATGTACAGGCACTGGAATACGGCATGCCGCCGGCAGGCGGCTGCGGCATCGGCATC GACCGGCTGGTCATGCTGCTCACCGACGCGCCCAGCATTCGCGACGTCATTCTCTTCCCCGCCCTGCGCTTCGAAGGCTA A Protein sequence : MNTDAPHPPAADDSHLIAERRAKLAALREVGPAFPNDFKPAHQAMSLQAQHGGDEPDALEAAGVRVRVAGRMMLKRVMGK ASFATLQDGTGRIQIHVSNDVTGEEAHAAFKHYDLGDWIGCEGVLFKTRTGELTIRAEQVRLLVKSLRPLPDKFHGLEDV ETRYRQRYVDLIVTPESRERFALRSKAIAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQQMYLRIAPELY LKRLLVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYAAWWTYRDQMDFTEALIRNTAQLTCGTAVLTHQGRTLDLSAP FARLTLTQAIQKHAPDYTDAQLADDGFLRGELRRLDADHAPHKLKGMGLGALQLALFEQVAEHLLWEPTFIVDYPVEVSP LARASDADANTTERFELFITGREIANGFSELNDPEDQAARFQSQVQAKEAGDDEAMYFDADYVQALEYGMPPAGGCGIGI DRLVMLLTDAPSIRDVILFPALRFEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-122 | 55 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-76 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tint_0409 | YP_003642149.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-123 | 55 |
