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Name : Tint_0383 (Tint_0383) Accession : YP_003642124.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 414653 - 415876 bp Length : 1224 bp Strand : + Note : PFAM: integrase family protein; KEGG: tbd:Tbd_0943 putative integrase prophage protein DNA sequence : ATGGCATCCAACTTACTGACTGACGCGGCCCTGCGCCGCGCAAAGCCCACAGACAAGCTCCAGCGCCTGCGCGATGGTGA CGGGCTGTATCTCCTGCTGAGACCGGATGGCAAGCGCTGGTGGCGCTTTGACTACCGTTACGGGGGCAAGGATAAGACGC TCAGCGTGGGGGTCTATCCTGATGTGACGCTGGCGCGGGCTCGTCAGCGCGCGGATGAAATACGTCAGCAGTTACTGGAC GGCATCGATCCCAGCATCGCACGCAAGGCCAAAGTTACTGGCGTGGTTGCTGGCGAAGTCTCCGATTCCTTCGAGATCAT TGCCCGAGAATGGCATGCTGGACGGGCGCCCACGTTGTCCGGCAACACCTCAAAAAATATCCTGCTGCGACTGCAAAACA ACGCGTTCCCCTACATCGGCCAGAAGTCCGTGCGTGAACTACGCGCGCCGGATGTGCTGGACGTGCTGCGCCGCATCGAA GAACGCGGGCTGGGTGAAACGGCCAGGCGGGTGCATCAGCTTATCGCCCAGGTCATGCGCTATGCCGTCGCCACGGGGCG CGCGGACGCAGACCCTACTCCCGCCCTACGGGGAGCGCTCAAGCCCGTCATGGTTCGGCACCATGCTGCGGTCATCGAGC CGGCTGAGCTTGGGGCCATGCTGCGCGCCTTCGATGGCTACACGGGGGGCGTGGTGGTGCGAACTGCTTTGCAGTTGCAG GTCATGCTGTTCGTTCGCCCGGGCGAGTTGCGGCACATGGAATGGGCAGAACTCGATCTGGGCGGCGCGCAGTGGCGCAT CCCCGGCGAGAAGATGAAGATGCGCGAACCGCATATCGTTCCGCTCCCCCGTCAAGCCGTCGCCCTGCTCAAAGACTTGC AGCCGTTCTCCTGCCGCAGCCGGTATGTATTCCCCTCGCCGCGCAGCAAAGACCGGCCAATGTCCGAAAACGCGGTGAAT GTCGCGCTGCGAACCTTGGGCTATGACCGAGACACCGTGACCGGCCACGGATTTCGCGCCACGGCGCGCACCATTTTGGA TGAAAAGCTGCGCTACCGGGTCGAGGTCATCGAGATGCAGCTTGCGCACGCGGTGCGCGATCCGCTAGGGCGCGCCTACA ACCGCACTAAGTACCTGGAAGAACGCAAGGACATGATGCAGGCGTGGGCGGACTACCTGGGCAAAATCAGGGCCGGGGCG GATGCGGTGAATATTTGGGCTTGA Protein sequence : MASNLLTDAALRRAKPTDKLQRLRDGDGLYLLLRPDGKRWWRFDYRYGGKDKTLSVGVYPDVTLARARQRADEIRQQLLD GIDPSIARKAKVTGVVAGEVSDSFEIIAREWHAGRAPTLSGNTSKNILLRLQNNAFPYIGQKSVRELRAPDVLDVLRRIE ERGLGETARRVHQLIAQVMRYAVATGRADADPTPALRGALKPVMVRHHAAVIEPAELGAMLRAFDGYTGGVVVRTALQLQ VMLFVRPGELRHMEWAELDLGGAQWRIPGEKMKMREPHIVPLPRQAVALLKDLQPFSCRSRYVFPSPRSKDRPMSENAVN VALRTLGYDRDTVTGHGFRATARTILDEKLRYRVEVIEMQLAHAVRDPLGRAYNRTKYLEERKDMMQAWADYLGKIRAGA DAVNIWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 8e-65 | 42 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-65 | 41 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 2e-65 | 41 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-65 | 41 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-65 | 41 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 2e-65 | 41 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 2e-65 | 41 |
| int | ADD91747.1 | P4 integrase | Not tested | PAI-I AL862 | Protein | 7e-62 | 41 |
| int | AAK16198.1 | Int | Not tested | PAI-I AL862 | Protein | 7e-62 | 41 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 6e-66 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tint_0383 | YP_003642124.1 | integrase family protein | VFG0783 | Protein | 1e-65 | 41 |
