Gene Information

Name : Tint_0380 (Tint_0380)
Accession : YP_003642121.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Virulence
Product : prepilin peptidase
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : 3.4.23.43
Position : 410138 - 411007 bp
Length : 870 bp
Strand : -
Note : KEGG: dac:Daci_5490 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV

DNA sequence : 
ATGCCCGATTTCGGCGCGCTGCCGCTGACGTTCTGGATCGTGGCCGCCGGGCTGTTCGGTCTGGCGGTGGGCAGCTTTCT
GAACGTGGTCATCTACCGTCTGCCGGTGATGATGGAGCGACAGTGGCAGGCCGATGCCCACGCCACGCTTCATCCGGACG
CTCAAACCCAGGCTGCCGAGCGCTTCGATCTCATCGCACCGCGTTCGCGCTGTCCGTCCTGCGGTCATCAGATTCTGTGG
TGGGAGAACATTCCGGTGCTCAGTTATCTGTTCCTCCGCGGGCGTTGCTCGAGTTGCCACGCGAAGATTTCGCCGCGCTA
TCCGCTGGTCGAACTGATCACTGCGCTGCTGACTGCGGCGGTGGTCGTGCGCTGGGGTGCGAGCGGGGACAGTCTGGCCT
ACATCGTCCTGCTTTGGGCGCTGATCACCCTGGCCTTGATCGATTTCGACACCACGCTGCTGCCCGACAGCATCACCCTG
CCTCTGTTGTGGCTCGGGCTGCTGTGGCACGCCTGGCTGCACCCGGAGCAGCTTTCCAGCGCGGTGTGGGGTGCGGCTGT
CGGCTACCTCGCGCTCTGGACGGTCTACCAAGGTTTCAAGCTGTTGACCGGCAAGGAGGGCATGGGCTTTGGCGACTTCA
AGCTGCTGGCTGCACTCGGCGCCTGGTTTGGCGTTGCCGCGCTGCTGCCCATCATTTTGCTGTCCAGCATTTGCGGCGCG
GTGATCGGCATCGCCTTGCAGTTGCTCAAACTGACGGAGCGCGGCCGCCCGATTCCTTTCGGGCCCTTTCTCGCCGCCGC
CGGCATTTTGTTGCTGCTGATCGGGCCGAACACCCTGGTGGCCCTGCTGCTTCCCGTCTCCGGGGCATGA

Protein sequence : 
MPDFGALPLTFWIVAAGLFGLAVGSFLNVVIYRLPVMMERQWQADAHATLHPDAQTQAAERFDLIAPRSRCPSCGHQILW
WENIPVLSYLFLRGRCSSCHAKISPRYPLVELITALLTAAVVVRWGASGDSLAYIVLLWALITLALIDFDTTLLPDSITL
PLLWLGLLWHAWLHPEQLSSAVWGAAVGYLALWTVYQGFKLLTGKEGMGFGDFKLLAALGAWFGVAALLPIILLSSICGA
VIGIALQLLKLTERGRPIPFGPFLAAAGILLLLIGPNTLVALLLPVSGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_0380 YP_003642121.1 prepilin peptidase VFG0114 Protein 2e-41 52
Tint_0380 YP_003642121.1 prepilin peptidase VFG0234 Protein 9e-38 50
Tint_0380 YP_003642121.1 prepilin peptidase VFG1882 Protein 2e-34 44