Gene Information

Name : Tint_3054 (Tint_3054)
Accession : YP_003644713.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 3233062 - 3233997 bp
Length : 936 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vha:VIBHAR_02586 hypothetical protein

DNA sequence :
ATGAATGCATCACCACAATTTGAAGACCCTGCGGCCAAAGGCCGCCGAAACTTTCTCGGCAAAGCGCTCGGCGTCGCGGC
GGCAACGATGGGCGCCGCAGCCGCCGCGACCGTCGGCGCCGACGCCGCCGAAGTCAAACAGCCCGGCGACGACGCCTTCG
GTGACACGCCCGAGGCGCTCACGCCGGCCGGCACCGATTACGAGCTCGCGCACGACCGTTCCGTTTACGCCTATACCGCC
AAAGACGGCAACCTGGCCAAGGAAGGATTCGAGGGCAAACGCTGGGGCATGTTGATCGATCTGCGCAAGTGCATCGGCTG
CCAGGCCTGTACCGCCGCCTGCAAGTTCGAGAACAATATTCCCACCGGGGTGTTCCGCACTTGGGTGCCCGACGTCGAGC
TCGGCGTTTATCCGGATACCAAGCGCGCTTTTTTGCCGCGTTTGTGCAACCACTGCGAACGGCCCTCTTGCATCGAGGTC
TGCCCGGCTGGCGCGACCTGGCAGCGCAAGGACGGCATCGTCGAGATCGACTACGACCTGTGCTGGGGGTGCGGCGCCTG
TGTCAACGCCTGTCCGTATGACGCGCGCTTCATCAATCCGATCACCAAGACCGCCGACAAGTGCACTTTCTGCTCGCAGC
GCGTGGATCAAGGTCTGCTGCCGGCCTGCGTGGAAACCTGCGTGGGGGGCGCGCGCCAATTCGGAGATCTCAACGACCCG
AACGACCCCATGACCAAGCAGGTGCTCAGCGAAGCCATCCAGCAACTCAAACCCGGTACCGGCAACGAGCCGCGGGTCTT
CTACATCGGGCTGACCACCGAGCTGCAGAACAACCCACCCGGCATCCCGACGCTGTGGTCCAAGGAGCAACAGGACATCG
ACCGCAACGACCACGACTGGGATATCGCCACTGGCAAGGAGGCCGATCATGTCTAA

Protein sequence :
MNASPQFEDPAAKGRRNFLGKALGVAAATMGAAAAATVGADAAEVKQPGDDAFGDTPEALTPAGTDYELAHDRSVYAYTA
KDGNLAKEGFEGKRWGMLIDLRKCIGCQACTAACKFENNIPTGVFRTWVPDVELGVYPDTKRAFLPRLCNHCERPSCIEV
CPAGATWQRKDGIVEIDYDLCWGCGACVNACPYDARFINPITKTADKCTFCSQRVDQGLLPACVETCVGGARQFGDLNDP
NDPMTKQVLSEAIQQLKPGTGNEPRVFYIGLTTELQNNPPGIPTLWSKEQQDIDRNDHDWDIATGKEADHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-50 46
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-50 46
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-50 46
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-50 46
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 3e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_3054 YP_003644713.1 4Fe-4S ferredoxin VFG0486 Protein 2e-50 46