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Name : Tint_2912 (Tint_2912) Accession : YP_003644580.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 3082486 - 3083781 bp Length : 1296 bp Strand : - Note : KEGG: xcc:XCC2964 polymerase V subunit; PFAM: UMUC domain protein DNA-repair protein DNA sequence : GTGTTCGCGCTGATCGACGGCAACAACTTCTACGCGAGCTGCGAGTGCGTGTTCCAACCGGAACTGCGCGGCAAGCCGCT GGTGGTGTTGTCGAATAACGACGGCTGCGCCATCGCGCGTTCTGACGAGGCCAAGGCGCTGGGTGTGAAGATGGGACAAC CCATCTTTGAGGTGCCGCCCGCCGTGCGCCGCCAACTGGCAATCCGCTCGGCCAACTTCACCCTCTACGGCGACATGAGC GCGCGTGTGCTGGCCATCCTGCGCGAGGCCGCGCCGCGCGTCGAGTCTTACAGCATCGACGAATCCTTCCTCGACCTCAC CGGCATCCTCAAGCCCGGCTCGCGCGAGGCCTTCTGCCGCGAGCTGCGTGAGCGCGTGCATCGATGGACGGGCATTCCCA ACTGCGTCGGCATCGGCGCGACCAAGACGCTGGCCAAGCTTGGCAACCACGTCGCCAAGTCCGCCGTGCGCAAGCCCGGC AGTTATCCAGCCGAGCTGGGCCGCGTGGCCGACCTGTCGGCGTTGTCACCGCAAGGCTTGTCCGCAGTGCTGGCCGCCAC GCCCGTGGGCGAACTGTGGGGCGTCGGGCGGCGCTGGGCGGCCAAACTGCGCAGCATGAACATCGAGACGGCGCTGCAAC TGCGCGATGCGCCGCGTGCTCTGATTCTTGACAGCTTCGGCGTGGTGCTGTCACGCACGCAGCGTGAACTCGCGAGTGAG CCGTGCCTTGCTTTGGAGGAAGTCGAGCCCGATCGCCAGCAGATCATGGTGAGCCGATCCTTCGGTGAGCGTGTCGAGGA TCACCAGTCCATTGGTGAGGCTTTCGCCACCTTCGCGATGCGTGCCTGCGAGAAATTGCGCGCGCGTGGCCTCGTGGCCA GCGCCGTCGGCATCTTCGCCAACACGGACCACTTCCGCCCTGAACTGCACCAGCATCACCCGCAACGCACGACTGACCTG CCGCGCGCCACCAGCGACTCCCGCGTGGTGCTCAATACCATCCGTCAGATGCAGCGCGGCTTCCTCAAGGACGGCTACGC CTACAAGAAGGCTGGGGTGTGGCTGATGGATTTGAGCCGCCCCGATCAGTTGCAGCCGGACTTGTTCTCAACCATCACCA TCGGCGACGACAAACTGATGCAGACGCTGGATGCGATCAACCGCCGCTACGGGCGCGGCACGGTGGGATTGGGGGCGACC GGCTGGCGGGAACGTCCGCAGTGGGGAATGCGGCAGGCGACCCTGTCGTCGCGCTTCACCACGTCCTTGCGCGATCTGCC GCGCGCGATCTGCTAA Protein sequence : MFALIDGNNFYASCECVFQPELRGKPLVVLSNNDGCAIARSDEAKALGVKMGQPIFEVPPAVRRQLAIRSANFTLYGDMS ARVLAILREAAPRVESYSIDESFLDLTGILKPGSREAFCRELRERVHRWTGIPNCVGIGATKTLAKLGNHVAKSAVRKPG SYPAELGRVADLSALSPQGLSAVLAATPVGELWGVGRRWAAKLRSMNIETALQLRDAPRALILDSFGVVLSRTQRELASE PCLALEEVEPDRQQIMVSRSFGERVEDHQSIGEAFATFAMRACEKLRARGLVASAVGIFANTDHFRPELHQHHPQRTTDL PRATSDSRVVLNTIRQMQRGFLKDGYAYKKAGVWLMDLSRPDQLQPDLFSTITIGDDKLMQTLDAINRRYGRGTVGLGAT GWRERPQWGMRQATLSSRFTTSLRDLPRAIC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 1e-70 | 44 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 9e-66 | 43 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 9e-66 | 43 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-53 | 43 |
