Gene Information

Name : Tint_2908 (Tint_2908)
Accession : YP_003644578.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 3080492 - 3080788 bp
Length : 297 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: vei:Veis_4708 transposase IS3/IS911 family protein

DNA sequence : 
ATGACGACGACGATCAGGCGGGCGCGGTACACGCTGGAGTTCAAGCAGGAGGCGGTGCGCCTGGTCGAGGGCGGCCAGAG
TATTGCGGCGGCGGCACGCACGCTGGGCGTGGTGGATCAGACGCTGTTCAACTGGGTCAAGGCGGCTCGACTGGGCAAGC
TTACCGGTGCCGACAGCAAGGTCGTGAGCGCCGAGCAGATGGAGATCAGCCGGCTGCGGGCCGAGCTGGCGCGGGTGAAG
ATGGAGCGCGACATCCTGGGAAAAGCGATGGCGTACTTCGCCAAGGCAGCCAAGTGA

Protein sequence : 
MTTTIRRARYTLEFKQEAVRLVEGGQSIAAAARTLGVVDQTLFNWVKAARLGKLTGADSKVVSAEQMEISRLRAELARVK
MERDILGKAMAYFAKAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-11 46
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-11 46
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 2e-08 46
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 1e-08 46
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 1e-08 46
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-11 45
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 2e-11 45
unnamed AAF09021.1 unknown Not tested SHI-O Protein 5e-11 45
unnamed AAF09029.1 unknown Not tested SHI-O Protein 5e-11 45
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 3e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_2908 YP_003644578.1 transposase IS3/IS911 family protein VFG1707 Protein 6e-12 45