Gene Information

Name : Tint_2864 (Tint_2864)
Accession : YP_003644534.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3036920 - 3037648 bp
Length : 729 bp
Strand : +
Note : KEGG: psa:PST_2521 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGCAGCGCCGTCACCCCATCCCCGCCCCCTGTGCTGCGCCTTGACGGCCTGCGCAAGGCCTATGGCGTGGGCACGCC
GCTCGAAGTGGAGGTGTTGCACGGCATCGACCTCACGCTGCAGGGCGGAGAGTTTGCCGCGCTCATCGGCCCGTCCGGTT
CGGGCAAGAGCACCCTGCTCAACCTCATCGGCCTGCTCGACACGCCCACCCGCGGCGAAATTCATGTGCAGGGCCGTCCC
ACCGTGGATTTGAACGATACCGAGCGCACTGCCCTGCGCGGCCGCTCACTGGGCTTCGTGTTCCAGTTCCACCACCTCAT
CAATGCCTTCAGCGTGATCGACAACGTGATGATGCCCGCGCTGCTCGGCGGTGCAAAGCCCGATGCCGCCACGCGCGAGC
GCGCCCTCGAACTGCTCGACGCCGTCGGGCTGGCGATGCACGCCCACAAACGCCCGACCGAACTCTCCGGCGGCCAGCAG
CAGCGGGTAGCCATCGCCCGGGCGCTGATGATCCGCCCGCCCATCCTGTTGGCCGACGAGCCCACCGGCAACCTCGACTC
GCGCGCCGCCGACGAGGTGTTCGCGTTGTTCCGCCGCTTCAACCAGTCCTTCGGCTGCGCGGTGCTGCTGGTGACGCACG
ACCCGCGCATCGCCGCACGCTGCGACCGGGTGCTGGAAATGCTCGATGGCCGATTGGTGGCGGATCGCGCTCAAACGGCT
CAGGCATAA

Protein sequence : 
MSSAVTPSPPPVLRLDGLRKAYGVGTPLEVEVLHGIDLTLQGGEFAALIGPSGSGKSTLLNLIGLLDTPTRGEIHVQGRP
TVDLNDTERTALRGRSLGFVFQFHHLINAFSVIDNVMMPALLGGAKPDAATRERALELLDAVGLAMHAHKRPTELSGGQQ
QRVAIARALMIRPPILLADEPTGNLDSRAADEVFALFRRFNQSFGCAVLLVTHDPRIAARCDRVLEMLDGRLVADRAQTA
QA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_2864 YP_003644534.1 ABC transporter NC_008702.1.4606598. Protein 3e-33 45
Tint_2864 YP_003644534.1 ABC transporter NC_012469.1.7686878. Protein 1e-36 42
Tint_2864 YP_003644534.1 ABC transporter CP001581.1.gene798.p Protein 3e-38 42