Gene Information

Name : Tint_2778 (Tint_2778)
Accession : YP_003644448.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2947908 - 2948375 bp
Length : 468 bp
Strand : -
Note : KEGG: ctt:CtCNB1_0634 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGAATGATGGTTTGAAAGGGGTTTCATCCGAGGTGCTGCGCGCGCCCGCGGCCCGTCGCAAAGCGCGCGGTTTCACGCT
GATCGAGCTCATGGTGGTGCTGGTCATCATGGGCGTGCTGGCGGCGCTCATCGTGCCCAACATCATGGGCCGCACCGACG
AGGCGCGGCAAACGGCCGCCAAGACGGATATCGCCACCATCATGCAGGCGCTCAAGTTGTACAAACTGGATAACGGCATT
TACCCCACCCAGCAGCAGGGCTTGCAGGCGTTGGTGGTCAAGCCCACCACGCCGCCGATTCCCAACAACTGGAAGCCCTA
TCTCGAAAAGCTGCCGACCGATCCGTGGGGCAACCCCTATCAATATCTCAACCCGGGCGTGAAAGGTCCGGTGGATGTGT
TTAGCTATGGCGCAGACGGCAAACCCGGCGGAGAAGGGGCAAATGCCGACATTGGCAGCTGGCAATAA

Protein sequence : 
MNDGLKGVSSEVLRAPAARRKARGFTLIELMVVLVIMGVLAALIVPNIMGRTDEARQTAAKTDIATIMQALKLYKLDNGI
YPTQQQGLQALVVKPTTPPIPNNWKPYLEKLPTDPWGNPYQYLNPGVKGPVDVFSYGADGKPGGEGANADIGSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-32 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-32 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_2778 YP_003644448.1 general secretion pathway protein G VFG1871 Protein 6e-42 62
Tint_2778 YP_003644448.1 general secretion pathway protein G VFG0180 Protein 1e-40 62
Tint_2778 YP_003644448.1 general secretion pathway protein G VFG2050 Protein 1e-32 53