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Name : Tint_2769 (Tint_2769) Accession : YP_003644440.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2938118 - 2939542 bp Length : 1425 bp Strand : - Note : TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: bgl:bglu_1g00370 general secretory pathway protein E; SMART: AAA ATPase DNA sequence : ATGTCCGTGCGTCATCCCTTGCCCTATACCTTCTGCCGCGACCAGGCGGTGCTGGCCGAAGACGACGGCCAGGGCGTCGA ACTCTGGATGTGCGAGGCCACGCGGCCCGCTGCGCTGGCCGAGGTGCAGCGCCAGTATGTGCTGTGCGCGGTGCACCGCA CCACCGCTGAAGACCTGCAGGCGCGCATCGGCGCGGCCTACGCTGCCCGCGATGGCAGCGCCGCCTCGGTCATCAGCGAA GTGGAGGGCGACGTCGATCTGGGCCGGCTGATGCAGGACATCCCCGCGGTGGAAGACCTGCTCGAAGCCGCCGACGACGC GCCCATCATCCGCATGCTCAACGTCTTGTTCACCCAGGCCGCGCGCGAAGGGGCTTCGGACATTCACATCGAGCCCTATG AAACCGCTTCGGTGGTGCGCTTTCGCGTGGACGGCACGCTGCGCGAAGTGGTGCGGCCCAACAAGGCGCTGCACGGCGCG CTGATTTCGCGCATCAAGATTCTTTCGCAGCTCGACATCGCCGAAAAGCGTCTGCCGCAGGACGGCCGCATCGCCCTGCG CATCGGCGGCCGCACCCTCGATGTGCGCGTGTCCACCCTGCCTTGCGCGCATGGCGAACGCGCCGTGCTGCGCTTGCTCG ACAAATCGGCGGCGCGGCTGAATCTGCGCGCCGTGGGCATGGCGCCCGACATGCTCGACCACTTCGATGCCCTCATTCGC GCGCCGCACGGCATTCTGCTGGTCACCGGCCCGACCGGCAGCGGCAAGACCACCACGCTGTACTCGGCGCTGAGCCGACT CGATGCCAGCACCACCAGCATCATGACGGTGGAAGACCCGATCGAGTACGACCTGCCCGGCATCGGCCAGACGCAGGTCA ACGCCCGCATCGACCTCACCTTTGCCCGAGCTCTGCGCGCCATCCTGCGGCAAGACCCCGACGTGGTGATGATCGGCGAA ATCCGCGATTTCGAAACCGCGCAGATCGCCATTCAGGCCTCGCTCACCGGCCACCTGGTGCTCGCCACTCTGCACACCAA CGACTCCGTCTCGGCCGTCACCCGCCTGACCGATATGGGCGTCGAACCCTTCCTGCTTGCCTCTTCGCTGCTGGGCGTGC TGGCGCAGCGGCTGGTGCGCCAACTCTGCCCGGCCTGCAAAGTGCCGTCGCCCGACGGCCAGGGTTTCGTGCCCGTGGGT TGCCCCGCGTGCAATCACACCGGCTACACCGGGCGTACCGGCGTGTTCGAGCTGTTCGAAGTGGACGACGGTCTGCGCGC CGCCATTCACGCCCGCGCCTCCGAGGCCGAGTTGCGCCGCCTGGCCCAGGCCACGGGGATGCGCAATATGCGCCAGGATG GGCAACGCTATATCGACACCAGTATCACCAGTCTGGCCGAGTTGCTGCGCGTGACGCGTGATTGA Protein sequence : MSVRHPLPYTFCRDQAVLAEDDGQGVELWMCEATRPAALAEVQRQYVLCAVHRTTAEDLQARIGAAYAARDGSAASVISE VEGDVDLGRLMQDIPAVEDLLEAADDAPIIRMLNVLFTQAAREGASDIHIEPYETASVVRFRVDGTLREVVRPNKALHGA LISRIKILSQLDIAEKRLPQDGRIALRIGGRTLDVRVSTLPCAHGERAVLRLLDKSAARLNLRAVGMAPDMLDHFDALIR APHGILLVTGPTGSGKTTTLYSALSRLDASTTSIMTVEDPIEYDLPGIGQTQVNARIDLTFARALRAILRQDPDVVMIGE IRDFETAQIAIQASLTGHLVLATLHTNDSVSAVTRLTDMGVEPFLLASSLLGVLAQRLVRQLCPACKVPSPDGQGFVPVG CPACNHTGYTGRTGVFELFEVDDGLRAAIHARASEAELRRLAQATGMRNMRQDGQRYIDTSITSLAELLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-103 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-103 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tint_2769 | YP_003644440.1 | general secretory pathway protein E | VFG0182 | Protein | 9e-108 | 59 |
| Tint_2769 | YP_003644440.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-104 | 51 |
| Tint_2769 | YP_003644440.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-102 | 50 |
| Tint_2769 | YP_003644440.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-68 | 47 |
