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Name : Tint_2117 (Tint_2117) Accession : YP_003643798.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2261643 - 2263001 bp Length : 1359 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: lch:Lcho_2826 replicative DNA helicase; SMART: AAA ATPase DNA sequence : ATGCAAGACCAAGCCCTAGACGCCATTCGCACGCCGCCGCACTCCATCGAGGCAGAGCAGTCGGTGCTGGGCGGGCTGTT GCTCGACAACCAGGCCTTCGACAAGGTGGCCGATCTGCTGGTGGCGGCGCAGTTTTACCGGTTCGAGCACCGGGCGATTT TCCAGGCCATCGCCGACCTGATCAATCTGAGCAAACCGGCTGACGTGATCACCGTGCTGGAGGCGCTGCAATCCATCGGC AAGCACGAGGAATGCGGCGGGCTGCCCTACCTGAATTCGCTGGCGCAGTGCGTGCCCAGCGCTGCGAACATTCGCCGATA TGCCGAGATCGTGCGCGAGCGCGCGGTGCTGCGCCAACTGGTGACCATCAGCGACGAGATTGCACAGAACGCGCTCAACC CGCAAGGGCGGGGCGTGCAGCAGATTCTCGACGAGGCCGAGTCGCGTATTTTCGCCATCTCGGAGGAGGGGGCCAAGTCG GCCGCGGGCTTCCAGTCGATGAAGGGCCTGCTGGGTGAGTTGCTCAAGCGAGTGAGCGAGTTGGCCGAGCGCGGCGGCGC CGATACCACCGGGGTGCCCACGGGTTTTGCCGATCTGGACCGGATGACCGCGGGTTTGCAGCCTGGTGATCTGGTCATCG TTGCCGGCCGTCCTTCCATGGGCAAGACGGCGTTTTCGCTGAACATTGCCGAACATGTGGCGATCAATGAGCAACTGCCG GTGGCGGTGTTCAGTATGGAAATGGGCGCGTCGCAGTTGGTGTTGCGCGTGGTGGGTTCGATGGGGCGGATCGACCAGAG CCATCTGCGTACCGGCCAACTCACCGAAGACGAGTGGACGCGGCTGCCCGAAACCATCGAACGCTTGCAAGACGTGCACA TGCACATCGATGAAACCCCGGCGCTCAATCCGCTGGAACTGCGGGCGCGTTCGCGACGTCTGGCCCGTCAGTTCGGCGGG CGGCTGGGCTTGATCGTGGTCGATTACCTGCAGCTCATGTCGTCGTCGCGAGACGGCGAGAACCGCGCCACTGAAATCTC CGAGATTTCACGCTCGCTCAAGGCTCTGGCCAAGGAACTGCATTGCCCGGTGATCGCGCTGTCGCAGCTCAATCGCGACC TCGAAAAGCGCACCGACAAACGACCGGTGATGAGCGATCTGCGTGAATCGGGCGCCATCGAGCAGGATGCCGACGTGATC CTGTTCATCTACCGCGACGAGGTCTACAACAAAGACTCGAAAGACGCCGGGGTGGCTGAAGTCATTATCGGCAAACAGCG TAACGGGCCGATCGGCGTGGTGCATCTCGCCTTCCTCAAACCGCTGACGCGGTTTGAAAATCTGACGCGCGAATTCTGA Protein sequence : MQDQALDAIRTPPHSIEAEQSVLGGLLLDNQAFDKVADLLVAAQFYRFEHRAIFQAIADLINLSKPADVITVLEALQSIG KHEECGGLPYLNSLAQCVPSAANIRRYAEIVRERAVLRQLVTISDEIAQNALNPQGRGVQQILDEAESRIFAISEEGAKS AAGFQSMKGLLGELLKRVSELAERGGADTTGVPTGFADLDRMTAGLQPGDLVIVAGRPSMGKTAFSLNIAEHVAINEQLP VAVFSMEMGASQLVLRVVGSMGRIDQSHLRTGQLTEDEWTRLPETIERLQDVHMHIDETPALNPLELRARSRRLARQFGG RLGLIVVDYLQLMSSSRDGENRATEISEISRSLKALAKELHCPVIALSQLNRDLEKRTDKRPVMSDLRESGAIEQDADVI LFIYRDEVYNKDSKDAGVAEVIIGKQRNGPIGVVHLAFLKPLTRFENLTREF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-95 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 4e-83 | 47 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 5e-85 | 46 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-83 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 6e-84 | 45 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-78 | 44 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-78 | 44 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-71 | 43 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-82 | 42 |
