Gene Information

Name : Tint_2113 (Tint_2113)
Accession : YP_003643794.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Unknown
Product : class I and II aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 2257200 - 2258432 bp
Length : 1233 bp
Strand : -
Note : PFAM: aminotransferase class I and II; KEGG: mpt:Mpe_A1540 aminotransferase AlaT

DNA sequence :
GTGCGCGAATTCCGGAAGTCCGACAAATTAGCCGATGTCTGCTATGACATCCGAGGTCCCGTGCTCGACAAGGCGCGGCA
GATGGAAGAGGAGGGGCAGCGGATCATCAAGCTCAACATCGGCAATCTGGCCGTGTTCGGCTTCGAGCCGCCCGATGAGA
TCGTGCAGGACATGATCCACAACCTGCCCAGTGCTGCGGGCTACACCGATTCCAAGGGCTTGTTCGCGCCGCGCAAGTCC
ATCGTGCATTACACGCAGGAAAAGGGCATTGCGGGGGTGAGCATCGACGATGTGTTCATCGGCAACGGCGCCTCCGAGCT
CATCAATATGAGCATGAACGCGCTGCTCAACAATGGCGACGAAGTGCTGATTCCCGCGCCGGATTACCCGCTCTACACCG
CGTCGGTGGCACTTTCGGGCGGCAAGCCGGTGCACTACATCTGCGACGAGCAGTCGGACTGGTATCCGGACATTGCCGAC
ATCCGCAGCAAGATCACGCCCAACACTCGGGCCATCGTGGTGATCAACCCCAACAACCCGACCGGTGCGCTGTACCCGCG
CGAGTTGCTCGAAGAGATCGTGCAGGTGGCTCGTGAGCATGAACTCATCGTGTTCGCTGATGAGATTTACGACAAGACGC
TGTACGACGGCAACACCCACACCAGCATCGCCTCGCTGGCCGACGATGTGCTGTTCATCACCTTCAACGGCCTGTCGAAA
AACTACCGCTCCTGCGGCTACCGCTCGGGCTGGATGGTGGTGTCGGGCAACAAACGGTGCGCGCGCGACTACATCGAGGG
CCTGACCATGCTGGCCTCGATGCGCCTGTGCGCAAACACGCCGGGGCAGTTGGCGATTCAGACCGCGCTGGGCGGTTATC
AGAGCATCAAGGATCTGGTCGCGCCGCAGGGGCGCCTGACCAAGCAGCGCGATCTGGCTTACGACCTGCTCACGCAGATT
CCGGGGGTCAGCGTGGTGAAACCGAAGGCGGCGCTGTATATGTTCCCGCGGCTCGATCCCGAGATTTACCCCATCGCCGA
CGATCAACAGTTCGCCTACGACCTGCTGGCGCAGGAAAAAGTGTTGATCGTGCAGGGTACCGGCTTCAACTGGCCGCAGC
CCGACCATTTCCGGCTCGTTTTTCTGCCCAATGCCGACGATCTGACGGAAGCCATCGGCCGCATCGCGCGCTTTCTAGAA
ACCCTCCGCAAGCGCAGCCGCGCGGCGGCCTGA

Protein sequence :
MREFRKSDKLADVCYDIRGPVLDKARQMEEEGQRIIKLNIGNLAVFGFEPPDEIVQDMIHNLPSAAGYTDSKGLFAPRKS
IVHYTQEKGIAGVSIDDVFIGNGASELINMSMNALLNNGDEVLIPAPDYPLYTASVALSGGKPVHYICDEQSDWYPDIAD
IRSKITPNTRAIVVINPNNPTGALYPRELLEEIVQVAREHELIVFADEIYDKTLYDGNTHTSIASLADDVLFITFNGLSK
NYRSCGYRSGWMVVSGNKRCARDYIEGLTMLASMRLCANTPGQLAIQTALGGYQSIKDLVAPQGRLTKQRDLAYDLLTQI
PGVSVVKPKAALYMFPRLDPEIYPIADDQQFAYDLLAQEKVLIVQGTGFNWPQPDHFRLVFLPNADDLTEAIGRIARFLE
TLRKRSRAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-118 60
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-118 60
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-118 60
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-118 60