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Name : Tint_1880 (Tint_1880) Accession : YP_003643577.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2026044 - 2026877 bp Length : 834 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: xca:xccb100_2471 IS1477 transposase ORFB DNA sequence : ATGATCAGCGAGCATCATTTGTCCGAGCGCCGAGCGTGCTGCCTCGTGGGGCTAAGCAGAGATAGCTATCGCCATGCGCC CCAGCAGGATGCGCTCAACACGGCACTGCACGGCAAGATCGTTGAGATTGCGCATGTCCGGCGGCGGTTCGGGTATCGGC GCATCCACGACCTGCTGCGCCCAGCATTTCCGGGCATCAACCATAAGCGGGTGTATCGGCTGTACAGCCAGGCCAACCTG GCTGTGCGCAAGCGCAAGAAGGTCCGGCGCGCGGCGGCCGAGCGCGTGCCGCTGCAACTGGCCAAAACGGTCAACGAGGT GTGGAGCATGGATTTTGTCAGCGACAGTTTGGCCAACGGCCGGCGGTTGAAGTGTCTGACCGTGGCCGACGACTTCAGCC ATGAATGCGTGGACATTGCGGTCGACTACGGCATTTCTGGCGCCTACGTGACGCGTCTGCTCGACCAAGCCGCGAGATTC CGCGGCTACCCCGCAGCCGTCCGAACCGACAATGGACCGGAGTTCACCAGCCGTGCATTCATGGCGTGGGCCACGAGTCG CGGCGTGCGCCACATCCTGATCGCACCGGGCAAGCCGACGCAGAATGGGTTCATCGAGAGCTTCAACGGCAAGTTCCGCG ACGAGTGCCTCAACGAGCAATGGTTCGAGACGCTGCACCAAGCCAGAGTGACCATCGCTGAATGGCGCCGCGACTTCAAC GAGGTCCGGCCCCACAGCAGTCTGGGCCGGATACCTCCGGCGCGATTCGCCGAGCAGCATCGCCAGCGCGCTGGCGATGC TGCTCATCCCGCAACCCCCAACGAGGTGAATTAA Protein sequence : MISEHHLSERRACCLVGLSRDSYRHAPQQDALNTALHGKIVEIAHVRRRFGYRRIHDLLRPAFPGINHKRVYRLYSQANL AVRKRKKVRRAAAERVPLQLAKTVNEVWSMDFVSDSLANGRRLKCLTVADDFSHECVDIAVDYGISGAYVTRLLDQAARF RGYPAAVRTDNGPEFTSRAFMAWATSRGVRHILIAPGKPTQNGFIESFNGKFRDECLNEQWFETLHQARVTIAEWRRDFN EVRPHSSLGRIPPARFAEQHRQRAGDAAHPATPNEVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 2e-53 | 61 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 4e-69 | 60 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 1e-43 | 57 |
