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Name : Tint_1827 (Tint_1827) Accession : YP_003643526.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1958115 - 1959416 bp Length : 1302 bp Strand : + Note : KEGG: afr:AFE_2858 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein DNA sequence : ATGATTGCCGCCCTGCTCATTTTCATCCTCACCCTGGTGTTCGTCATCTGGCAGCCGCGCGGTCTGGGCATCGGCTACAG CGCCCTGGGCGGCGCGGCGATCGCGCTGATGTTCGGCGTGATCAACTGGGGCGACATTCCAGTGGTGTGGCACATCGTCT GGGATGCCACTTTCACCTTCGTCGGGCTGATCATCATCTCGCTCATCCTCGACGACGCCGGGGTGTTTCACTGGGCCGCG CTGCATGTGGCGCGTTGGGGCGGCGGACGCGGGCGGCGGCTGTTTCCGCTGATCGTGGTGCTGGGTGCGGTGATTTCGGC GTTTTTCGCCAACGACGGCGCGGCGCTCATCCTCACGCCCATCGTGCTGGCCATGCTGCTGGCGCTGGGCTTCGGTCCGG CAGCGGCGCTGGCGTTCGTCATGGCCTGCGGTTTCGTCGCCGACACCACCTCGATGCCGCTGGTGATTTCCAATCTGGTC AACATCGTCACCGCGGGCTATTTCAACATTCCCTTCGACCGCTACGCCGCGGTGATGGTGCCGGTCGATCTGGCCGCGCT GGCCGCCACGCTGGTCGTGCTGATGCTGTTTTTCCGCCGCGACATTCCCGCAGGCTACGACCTCGCCCGGCTCGACGCGC CATCCAGCGCCATCAAGGACGCGCTGGTGTTTCGCTGGACCTGGCCGGTGATGGCCGTGCTGCTGGTGGCGTATTTCGTC ACCGCCGCGTGGCAGGTGCCGGTGTCGCTGGTCACCGGCATCGCCGCGCTGCTGCTGCTGGCTCTGGCCGGGCGCTGGTG GCGCGGCGGCCGCGGCGCGGTCATCGATCTGCGTCACGTCATCAAGGGCGCGCCGTGGCAGATCGTGCTGTTCTCGCTGG GCATGTACCTCGTGGTCTATGGCTTGCGCAATGCCGGGCTGACCGACTACCTGGCGCTGGCGCTCGAAGCGCTGGCCCGC CACGGCACCGTGGTCGCGGTGGTGGGCACGGGCTTCATCAGCGCGGTGCTGTCCTCGGTGATGAACAACATGCCCATGAC CCTGGTGGGCGCCCTGGGCATCCATCACGCGCAAGGCATAGACCCGGCGGTGCGCGAAGCCATGATCTACGCCCACGTCA TCGGCTGCGATCTCGGCCCCAAGTTCACGCCCATCGGCAGCCTGGCCACGCTGCTGTGGCTACACGTGCTCGACCGCAAG GGCGTGCACATCGGCTGGGGTTATTACATGCGCATCGGGCTGGCGCTGACCACACCGGTGTTGCTGATCACCTTGCTGGC GCTGGCCTGGCGTTTGGGCTGA Protein sequence : MIAALLIFILTLVFVIWQPRGLGIGYSALGGAAIALMFGVINWGDIPVVWHIVWDATFTFVGLIIISLILDDAGVFHWAA LHVARWGGGRGRRLFPLIVVLGAVISAFFANDGAALILTPIVLAMLLALGFGPAAALAFVMACGFVADTTSMPLVISNLV NIVTAGYFNIPFDRYAAVMVPVDLAALAATLVVLMLFFRRDIPAGYDLARLDAPSSAIKDALVFRWTWPVMAVLLVAYFV TAAWQVPVSLVTGIAALLLLALAGRWWRGGRGAVIDLRHVIKGAPWQIVLFSLGMYLVVYGLRNAGLTDYLALALEALAR HGTVVAVVGTGFISAVLSSVMNNMPMTLVGALGIHHAQGIDPAVREAMIYAHVIGCDLGPKFTPIGSLATLLWLHVLDRK GVHIGWGYYMRIGLALTTPVLLITLLALAWRLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-95 | 62 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-82 | 53 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 6e-83 | 52 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 5e-80 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tint_1827 | YP_003643526.1 | arsenical pump membrane protein | BAC0031 | Protein | 3e-92 | 62 |
| Tint_1827 | YP_003643526.1 | arsenical pump membrane protein | BAC0577 | Protein | 3e-95 | 62 |
| Tint_1827 | YP_003643526.1 | arsenical pump membrane protein | BAC0576 | Protein | 4e-95 | 62 |
| Tint_1827 | YP_003643526.1 | arsenical pump membrane protein | BAC0578 | Protein | 5e-96 | 62 |
| Tint_1827 | YP_003643526.1 | arsenical pump membrane protein | BAC0574 | Protein | 3e-82 | 51 |
| Tint_1827 | YP_003643526.1 | arsenical pump membrane protein | BAC0575 | Protein | 7e-84 | 51 |
