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Name : Tint_1646 (Tint_1646) Accession : YP_003643346.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1762174 - 1763466 bp Length : 1293 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: mpt:Mpe_A2692 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTCGACATCACCCTGCTGCGCAAAGACCTGCCCCACGTCATCGCCCGGCTCGAAACCCGTCAGTCCCCTCAGCCCTT CCTCGATGTGGCCCGCTTTGAAGCCCTCGAAACCGAGCGCAAAACCCTGCAGAAACAAACCGAAGATCTGCAGGCGCGGC GCAACCTGCTCTCCAAGCAGATCGGGCAGGCCAAAGCCAAAGGTGAGGATGTCGCGCCGATCATGGAAGAGGTCGGCCAC ATCAAAACCACGCTGGAAGCAGACGCCGCCCGGCTCGATGCCTTGCAAGCCGAACTGCAGGGTCTGCTCATGGCTGTTCC CAATTTGCCCGCGGCCGACGTGCCCGTCGGCGCGGATGAGACGCAGAACGTCGAACTGCGCCGATGGGGCACCCCGCGCA CGTTTGAATTCCCGGTGCGCGACCACGTCGATGTCGGGGCAGATCTCGGGCTGGACTTCGAGGCCGCAGCGCGCATCTCC GGTTCGCGTTTTGCCGTGCTGCGCGGGCCGATCGCCCGCCTGCACCGGGCCCTTGCCCAGTTCATGCTCGACGTTCACAC CACCGAACATGGCTACACCGAAGCCTATGTGCCTTACATCGTCTCGGCGCAAGCGCTGCGCGGCACGGGGCAGCTCCCTA AATTCGAGGAAGACCTCTTCCCCGTGAAGCACGGAGAGGGCGAGAGCCACTACCTCATTCCCACAGCCGAAGTGCCGCTG ACCAATCTGGTGCGCGATCAGATCGTCGATGCCGCCCAACTGCCGTTGCGCTTTGTGGCGCATACGCCGTGCTTTCGTTC CGAGGCCGGGTCGGGCGGGCGGGACGTGCGCGGCCTCATCCGCCAACACCAGTTCGACAAAGTCGAGCTCGTCTGGGTGA CGCGGGCAGAAGAATCAGCCACCGCGCTGGAACAACTCACCGCCCACGCCGAGAGCATCCTGCAACGCCTGCAATTGCCC TACCGCACCATCGTCCTCTGCACCGGCGACATGGGTTTCGGCAGCGCGCGCACTCACGATATCGAGGTCTGGCTCCCCGC GCAAAACACCTACCGCGAAATTTCGTCCTGCTCCAATATGGAAGCTTTCCAGGCCCGCCGGATGCAGGCGCGCTATCGCG CCGAGAACGGCAAGACAGAACTCGCGCACACCCTCAACGGCTCCGGCCTGGCAGTTGGGCGCACGCTCGTGGCGATCCTC GAAAACTACCAACGCGCTGACGGGGGTATCGACATTCCGCAGGCGCTCCAGCCCTACATGGGAGGACTGACCCAGATCGA GCCGCGTGCCTGA Protein sequence : MLDITLLRKDLPHVIARLETRQSPQPFLDVARFEALETERKTLQKQTEDLQARRNLLSKQIGQAKAKGEDVAPIMEEVGH IKTTLEADAARLDALQAELQGLLMAVPNLPAADVPVGADETQNVELRRWGTPRTFEFPVRDHVDVGADLGLDFEAAARIS GSRFAVLRGPIARLHRALAQFMLDVHTTEHGYTEAYVPYIVSAQALRGTGQLPKFEEDLFPVKHGEGESHYLIPTAEVPL TNLVRDQIVDAAQLPLRFVAHTPCFRSEAGSGGRDVRGLIRQHQFDKVELVWVTRAEESATALEQLTAHAESILQRLQLP YRTIVLCTGDMGFGSARTHDIEVWLPAQNTYREISSCSNMEAFQARRMQARYRAENGKTELAHTLNGSGLAVGRTLVAIL ENYQRADGGIDIPQALQPYMGGLTQIEPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-103 | 53 |
