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Name : Tint_1578 (Tint_1578) Accession : YP_003643283.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1689381 - 1690925 bp Length : 1545 bp Strand : - Note : KEGG: ajs:Ajs_3594 integrase catalytic subunit; manually curated; PFAM: Integrase catalytic region DNA sequence : ATGCCCACACCCAGGGTCACCATGAGCAAGATACGACACACACTGCAACTGCTGCACGGCGGGACTTTGAGCACCCGCCA AATCGGAGCCGCCCTCGGCATCTCCAAATCCACTGTCAGCGAAATCGCCAGCTACGCGCGCGTGGCCGGCGTGGACTGGG CGCTGGCCCAGACCTTGACCGACGAAGAGCTCCAGTCCCGGCTCTACAAACCGCCCGTACCCCGCGCTTCGCGCCACCTG GAGCCCGACTGGGCCCACATCCACCGCGAACTGCGCCGCCCCGGCGTCACCCTGCAATTGCTGTGGGAGGAGTACCAGCA GCAACACGCAGGCCAAGCCTACAAGTACAGCGCCTTCTGCGAGAAGTACCAAGCCTGGTCCCGGCGTTTGAAGCGTTCCA TGCGCCAGACCCACGAAGCCGGCGACAAGCTCTTTGTGGACTACGCCGGCCAGACCGTGCCCATCGTGGACGCCAGCACC GGCGAGATCACGCAGGCCCAGATATTTGTGGCCGTGCTGGGCGCATCAAACTACACCTATGCCTGCGCCACCGCCAGCCA GAAGGCCACCGACTGGGTGGCCAGCATCATGGGCGCACTGGAGTTCATCGGCGGTGTGCCCCGCCTGCTGGTGCCCGACC AGCCGCGTGCCTTGATGGTCCGCCCCGACCGCTACGAGCCCACCTCACACCGCTTGCTCGAAGAGCTCTCGGCGCATTAC GGCCTGCCCGTCATGCCCGCGCGCCCGGCCAAACCACGCGACAAACCCAAGGTAGAGGTGGGCGTGCAGGTGGTCGAGCG CTGGATTCTGGCCCGCCTGCGCCACCAGACCTTCTTCAACTTGGCCGCCCTGAACCGGGCGATTGCCACCTTGTTGGTGG ACTTGAACCAGCGCCCATTCAAGAAGCTGCCCGGCAACCGCGCCAGCGCCTTTACCGAACTCGACCGGCCAGCCCTGCGC CCACTGCCGGCTGCACGCATGGCCATCGCCCGCTTCAAGCCCGCCCGCGTCAATATCGACTACCACGTCGAGCTCGATGG CCACTACTACTCGGTGCCCCACGCCCTGGTGGGCGAGGTGATGGAGCTGCGCATCACGGCCACCACGGTGGAGGTCCTGC ACGGCAACAAGCGGGTAGCCGCCCACACGCTCAATGGGCGCAAGGGCGCACACACCACCACGCCTGAGCACATGCCGGCC TCGCACCGGGCGCACCTGCAGTGGACGCCGGCCAAGCTCATCGCCTGGGGCGAACGAATAGGTGCGGCCACCGCCGCCGT GGTGCGCTGGCAGATGGAGCACCGCGCCCATCCCGAGCAGGGTTACCGCTCCTGTCTGGGCCTCATGCGCCTGGGCCGTG AGTACGGGGCTGACCGGCTGGAGGCCGCCTGTGCGCGGGCGCAGTCGATTCGCTCACCGTCCTACAAGAGCATCGCCTCC ATCCTGAGTTGTGGCCTGGACCAGCGCCCGCTGGAGACCCCCATCCCCATGCAGGCGAGCCTGCCGCTGCACGAGAACGT GCGCGGCCCGGGCTATTACCACTGA Protein sequence : MPTPRVTMSKIRHTLQLLHGGTLSTRQIGAALGISKSTVSEIASYARVAGVDWALAQTLTDEELQSRLYKPPVPRASRHL EPDWAHIHRELRRPGVTLQLLWEEYQQQHAGQAYKYSAFCEKYQAWSRRLKRSMRQTHEAGDKLFVDYAGQTVPIVDAST GEITQAQIFVAVLGASNYTYACATASQKATDWVASIMGALEFIGGVPRLLVPDQPRALMVRPDRYEPTSHRLLEELSAHY GLPVMPARPAKPRDKPKVEVGVQVVERWILARLRHQTFFNLAALNRAIATLLVDLNQRPFKKLPGNRASAFTELDRPALR PLPAARMAIARFKPARVNIDYHVELDGHYYSVPHALVGEVMELRITATTVEVLHGNKRVAAHTLNGRKGAHTTTPEHMPA SHRAHLQWTPAKLIAWGERIGAATAAVVRWQMEHRAHPEQGYRSCLGLMRLGREYGADRLEAACARAQSIRSPSYKSIAS ILSCGLDQRPLETPIPMQASLPLHENVRGPGYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 6e-97 | 47 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 3e-97 | 47 |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 4e-97 | 47 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 1e-94 | 44 |
