|
Name : Tint_1520 (Tint_1520) Accession : YP_003643232.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : transposase IS66 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 1626837 - 1628378 bp Length : 1542 bp Strand : - Note : PFAM: transposase IS66; KEGG: rfr:Rfer_3059 transposase IS66 DNA sequence : ATGCTCAGCGCCCCAGATACCGACCGACTCCAGGCCCTGGGCGACGATCCGGCCGCACAGTACGCGCGCACAGTCATTGC ACAGATGCAGGCTGATTTGAAGTTCCAGCAGACCAGGATTGCGGCGCTGAGCCTTGAGCTGGCGCGCCTCAAGCAATGGC GCTTCGGCCAGTCCAGCGAGAGCCTGGACAGCCCCCAGGGCGAGCTGTTCGATGCGAAGACGCAGGCGCTGCTTGAGCAG GAAGAACAGGCCGAGGACCGCGCCGCCGAGCAAGAGCGCCGCGATCCGAGCAAACGTCGCCCCAAACGCCAGCCCCTGCC CGGGCGGCTTGAGCGCATCGAGCATCGCTACGAGATCGACTCCGGACTGTGCCCGCAGGGCCACACCCTGAGCCGCATCG GCGAGGAGATCAGCGAGCAGCTCGACTGCGAGCCTACGCGCTTCTTCGTGCACCGGCACATCCGCGACAAGTACGCCTGC GCCTGCTGCCAGACAGTACTGGCCGCCGCCATGCCAGCGCAAATCATCGACAAGGGCATCCCAGCTCCCGGCCTGCTGGC CCAGGTGGTGCTGGCCAAGTTGGATGATCACCTGCCGCTGTATCGCCAGGAGGAGATCTACCGCCGCAGCGGCGTGCACA TCCCGCGCTCCACCATGGCGCAGTGGGTGGGCCTGTGTGGCGTGCGCCTGGAGCCCCTGGCCCAGGCCCTCAAAGACCAT CTGTTGGCGCAGCCCGTGCTGCATGCCGATGAGACCCCGGTAGCCGAGCTGGCCCCAGGCACGGGCAAGACGCACCGGGT GTATGTCTGGGTGTACCGCAGCGCGTTGACCCCGGCTGTGGTGTTTGACTATTGCGCCAGCCGTGCCGGTGCGCATGCGC GCGACTTCCTGCAGGACTGGTCAGGCACCTTGCTCACCGATGACTTCAGCGGCTACAAGGCGCTGTATGCCCAAGGCCAG GTGGTGGAGGCGGGCTGCTGGGCGCATGTGCGCAGAAAGTTCTTCGAGGCGCACAAGCTCGTTGGCAGCGCGATTGCCCA GGAGGCGCTGGCGCGCATCGGGGCCTTGTATGCCATCGAGCAAACCCTTCGGGAGCATCCGCCCGATGGGCGCGCCGCGC TGCGCCAGCAGCGCAGCCTACCCCTGCTCGATGCCTTGCACGCCTGGTTGGTCGAGCAGCGCCAGCTTCTGGCCAAGGCG GACGCCACGGCGCGGGCGATCGACTATGCGCTGGGCCGCTGGAGCGCCTTGTGTGTGTTTGCCAGCGATGGGCGCGTGCC CATCGATAACAACCCCGTGGAAAACGCCATTCGACCTCTCGCCCTGGGTCGCAAAAACTGGCTGTTCGTGGGCTCGCCCC AGGCTGGTAGCAGGGCTGCCGTGCTCATGACGTTGATCGAATCGGCCAAGCTCTGCGAGGTCGATCCGTGGGCCTATCTC AAGGATGTGCTGACGAAGCTGCCCACTTGGCCCAACAGCCGTCTGAGCGAATTGCTGCCGCACAACTGGGCGAAATCGAA CGCCCCTGCACTCAGCACCTGA Protein sequence : MLSAPDTDRLQALGDDPAAQYARTVIAQMQADLKFQQTRIAALSLELARLKQWRFGQSSESLDSPQGELFDAKTQALLEQ EEQAEDRAAEQERRDPSKRRPKRQPLPGRLERIEHRYEIDSGLCPQGHTLSRIGEEISEQLDCEPTRFFVHRHIRDKYAC ACCQTVLAAAMPAQIIDKGIPAPGLLAQVVLAKLDDHLPLYRQEEIYRRSGVHIPRSTMAQWVGLCGVRLEPLAQALKDH LLAQPVLHADETPVAELAPGTGKTHRVYVWVYRSALTPAVVFDYCASRAGAHARDFLQDWSGTLLTDDFSGYKALYAQGQ VVEAGCWAHVRRKFFEAHKLVGSAIAQEALARIGALYAIEQTLREHPPDGRAALRQQRSLPLLDALHAWLVEQRQLLAKA DATARAIDYALGRWSALCVFASDGRVPIDNNPVENAIRPLALGRKNWLFVGSPQAGSRAAVLMTLIESAKLCEVDPWAYL KDVLTKLPTWPNSRLSELLPHNWAKSNAPALST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 8e-111 | 50 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 2e-75 | 45 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 5e-97 | 44 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 7e-82 | 44 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 1e-66 | 42 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 1e-66 | 42 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 1e-84 | 41 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 4e-85 | 41 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 6e-85 | 41 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 4e-85 | 41 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 6e-85 | 41 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 8e-85 | 41 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 4e-84 | 41 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 6e-85 | 41 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 4e-84 | 41 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 5e-85 | 41 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 4e-85 | 41 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 2e-79 | 41 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 4e-62 | 41 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 9e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tint_1520 | YP_003643232.1 | transposase IS66 | VFG1700 | Protein | 8e-76 | 45 |
| Tint_1520 | YP_003643232.1 | transposase IS66 | VFG0793 | Protein | 2e-85 | 41 |
| Tint_1520 | YP_003643232.1 | transposase IS66 | VFG1513 | Protein | 2e-62 | 41 |
