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Name : Tint_1289 (Tint_1289) Accession : YP_003643007.1 Strain : Thiomonas intermedia K12 Genome accession: NC_014153 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1381836 - 1383443 bp Length : 1608 bp Strand : + Note : manually curated; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: lch:Lcho_1272 ABC transporter-related protein; SMART: AAA ATPase DNA sequence : ATGCCTTCAACCCCTTTGCTCAAAGTACGCGATCTGCAGGTGCGTTTTGGCGCCCAAACCGTGGTGCATGGCGTCGATCT CGACATCGCCGCGGGCGAAAAAGTCGCGCTCGTCGGCGAATCGGGCTCGGGCAAGACCGTCTCGGCGCTGGCCTTGCTGC GTCTGCTGGACGGGGCGCAACAGACCGGCAGTGTGATGTTCGACGGGCGCGAACTCTCCACACTGAGCGAGCGCCAGATG CGCGGTCTGCGCGGCAAAGACATCGCCATGATCTTTCAGGAGCCGATGACCGCGCTCAACCCGCTACATCCGGTCGGACG GCAGATTGCCGAGGTGCTCGAATTGCACGAGGCGCTGTCGCGCCGCGCGGCTTGGGCGCGGGCAGTGGAGTTGCTGGGGC AGATGGGCATCGACCAGCCCGCGCGGCGTGCGGCGGACTATCCGCATCAGCTCTCCGGCGGCCAGAGGCAGCGGGTAATG ATTGCCATGGCGTTGGCTTGCCGCCCCCGCCTGCTGCTGGCCGACGAGCCCACCACCGCGCTCGACGTAACCGTGCGCCG CCAGATTCTCGATCTGCTCGACGCCTTGCAGGCCGAGTACGGCCTGGCCTTGCTGTTCATCACCCACGACCTTCATCTGG TGCGGCGCTATGCGCACCGCGTGGCCGTGATGCAGCAGGGCAGGGTGGTGGAAGCCGGAACGGTTACCTCAGTATTCGCC GCGCCGCAGCACCCCTATACGCAAATGCTGCTGCGCAGCCGCCCGCGCCGCCTCGTGCAGGAGTCCGAAAAAAATGCGGC GCCGCCGCCCACCGTGCTTCAGGCGCGCGCGCTGAGGGTGCGCTTCGCCCAAAACAGCGGTATCTGGCGCAAACACTGGC ACACCGTGCTGCAGGACGTTTCGCTGGAATTGCCCGCAGGGCAGACCTTGGGCGTGGTGGGCGAATCGGGCAGCGGCAAA TCGACCCTCGCGCTCGCACTGCTCGGCCTGCTGCGCCGTCAGGGCGGGGAGGTGAGTTTGCTGGGACGCGATCCGGCCCG GTTGTCCGCTGCCGCGCTGCGCCCCTTGCGCGCGCAGGCGCAAATCGTGTTCCAGGACCCGTTTTCCAGCCTGTCGCCGC GTCGCACTGTGGCGCAGATCGTCGAAGAGGGTCTGGAAATTCATCGCCCTGAGTGGAGTGCCGTGCAACGTCGCGAGCGC GCCCAGCAGATTCTGGCAGAAGTCGGCTTGCCGCTTTCTCCGGCCGAAATGCAACGCTATCCGCACGCATTTTCAGGTGG GCAACGCCAGCGCATCGCAATTGCTCGGGCCCTGATTCTGGAGCCCAAGGTGCTCATCCTCGACGAGCCGACCAGCGCAC TCGACGTCTCTGTGCAGCAGCAGGTGCTCGATCTGCTCGCTGCACTGCAGCAAAGGCACGGACTGGCCTATGTGCTCATC AGTCACGATCTGTCGGTCATTGGCGCGCTGTCGCACCGTGTGCTGGTGCTGCACCAGGGAAAGGTGGTCGAACAAGGGCC GACAGACGCCGTGCTGCGTGCGCCACGCCAGCCTTACACCCAGGCCTTGCTCGCAGCATCCGATCTGGGGGAAGAAGTGC GCCGATGA Protein sequence : MPSTPLLKVRDLQVRFGAQTVVHGVDLDIAAGEKVALVGESGSGKTVSALALLRLLDGAQQTGSVMFDGRELSTLSERQM RGLRGKDIAMIFQEPMTALNPLHPVGRQIAEVLELHEALSRRAAWARAVELLGQMGIDQPARRAADYPHQLSGGQRQRVM IAMALACRPRLLLADEPTTALDVTVRRQILDLLDALQAEYGLALLFITHDLHLVRRYAHRVAVMQQGRVVEAGTVTSVFA APQHPYTQMLLRSRPRRLVQESEKNAAPPPTVLQARALRVRFAQNSGIWRKHWHTVLQDVSLELPAGQTLGVVGESGSGK STLALALLGLLRRQGGEVSLLGRDPARLSAAALRPLRAQAQIVFQDPFSSLSPRRTVAQIVEEGLEIHRPEWSAVQRRER AQQILAEVGLPLSPAEMQRYPHAFSGGQRQRIAIARALILEPKVLILDEPTSALDVSVQQQVLDLLAALQQRHGLAYVLI SHDLSVIGALSHRVLVLHQGKVVEQGPTDAVLRAPRQPYTQALLAASDLGEEVRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-78 | 45 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-78 | 45 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-78 | 45 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-78 | 45 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 9e-82 | 42 |
