Gene Information

Name : Tint_1090 (Tint_1090)
Accession : YP_003642810.1
Strain : Thiomonas intermedia K12
Genome accession: NC_014153
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1163677 - 1163973 bp
Length : 297 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: vei:Veis_4708 transposase IS3/IS911 family protein

DNA sequence : 
ATGACGAAGACGATAAGGCGGGCGCGGTACACGCTGGAGTTCAGGCAGGAGGCGGTGCGCCTGGTCGAGGGCGGCCAGAG
TATTGCGGCGGCGGCGCGCACGCTGGGCGTGGTGGATCAGACGCTGTTCAACTGGGTCAAGGCGGCTCGACTGGGTAAGC
TGACCGGTGCCGACAGCAAGGTCGTGAGCGCCGAGCAGATGGAGATCAGCCGGCTGCGCGCCGAACTGGCGCGGGTGAAG
ATGGAGCGCGACATCCTGGGAAAAGCGATGGCGTACTTCGCCAAGGCAGCCAAGTGA

Protein sequence : 
MTKTIRRARYTLEFRQEAVRLVEGGQSIAAAARTLGVVDQTLFNWVKAARLGKLTGADSKVVSAEQMEISRLRAELARVK
MERDILGKAMAYFAKAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 4e-11 44
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 4e-11 44
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 2e-11 44
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-11 44
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 4e-08 44
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 3e-08 43
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 3e-08 43
unnamed AAF09021.1 unknown Not tested SHI-O Protein 8e-11 42
unnamed AAF09029.1 unknown Not tested SHI-O Protein 8e-11 42
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 5e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tint_1090 YP_003642810.1 transposase IS3/IS911 family protein VFG1707 Protein 1e-11 44