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Name : TherJR_0963 (TherJR_0963) Accession : YP_003639730.1 Strain : Thermincola potens JR Genome accession: NC_014152 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 984780 - 987440 bp Length : 2661 bp Strand : + Note : TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: pth:PTH_1976 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class DNA sequence : ATGACCCAGGGCAAGTTTATTATTATAGACGGAAACAGCCTGGTTTACCGGGCTTTTTACGCTTTACCGCTCTTAAAAAC CACTACGGGCGTTTATACAAATGCCGTATACGGCTTCACAACCATGCTGATGAAGGTTTTGAACGAAGAAAAACCAGCCT GCCTGGCCATAGCTTTTGATAAGGGGAAAACTACTTTTCGCAATGAGCATTTTGAAGATTACAAGGGGCACCGGAAAGCA ACACCTGACGAACTGAAGCCCCAGTTTCCCCTGGTGAAAGAAATTGTGCGCGCTTTTCGCATTCCCGTTTACGAAATAGA AGGTTATGAAGCTGATGATATAATAGGTACAGTTTCCTTGAAAGCAGAAGAAATGGGATATGAAACTGTAATTGTTACGG GCGACAGGGACGCGTTGCAGTTGGTTTCACCCAAAACAAGAGTTATGTTAACCAAAAAAGGCATATCAGAAATGGAACTT TACGACGAAAACAAGGTGGCCGAACGTTACGGGCTCAAACCTGCGCAGATAATAGACATGAAAGGATTAATGGGCGATAC TTCCGATAATATCCCCGGGGTGCCGGGTATTGGAGAAAAAACGGCCGCCAAACTGGTCAGAGAATATGGCTCCGTGGAAG AACTGCTGGCCCAAAGAGGTACAGTTGCCGGAAAACTCCGGGAAAAACTCGAGCAGTACGCGGAACAGGCTCTTCTCAGC AAAAAACTGGCTACGATTATCAGGCATGTGCCTATAGAGATAGATTTACGGGAGTGTGTGGTGGAAGAACCTGACTACGC GAAACTTTTGGAGTTGGGACGGAGTTTAGAATTTAAGGCTTTGACAAAGCTGGCCCAGGAAAAGGCGCCGGAACAGCCGG AAAAATTATCTGAACCTGTTGATGAAGCCAAGCAATTGCAAATTAATGGCGAGTACAGACAGTATAACTTTGACGAGGCT TTAGCTTCTATAACCCGATTTGTGGAACAGAAAAAAGACCTGGCCCTTGTTTTACAAACCTCAAACCAGGACCCCTGGTC TGCCGGCATTCTTGGATTGGCCTGGTCAGCCGAACCGGGGAGCGGCGGGTATCTTGCCGGTGAGGAACTGCAGCCTGCAG ATAAACTTACCCGTATCCTGGATACGGTCCTTTGGACGAAGGGCTGGGTATGCTTCCATGATGCCAAAAGGACCGATATC TTACTGCGACGTTTAGGCAACAAGCCTGTTCGCGCAGGATTTGACACCATGTTGGCGGCTTACCTTTTGGATCCTTCTGT TTCCAACCTCGATTTAGCTGCTTTATCTATAAAGTATTTGGGGCAGGAGTTGAGCCCTGGAGAAGACTACAGGTCTTTTT GTGCCCAGGCCGATATTATATTGCGGCTGGTACCTGTACTGCATGAGAAGCTGGCCGAGCTGAACATGCTTGACCTGTAT TTTGATGTGGAAATGCCCCTCCTGCATATTCTGGCCGATATGGAATTCAGCGGGGTCAAGCTGGACAAGGAATACCTGGA AGCCATGTCTGTGGATTTAAGTACGGAAATCGACCGGATTACTGGGGATATTTACAGGCTGGCCGGGGAGGAATTCAACA TCAATTCTACCCGGCAGTTGGGGACCATTCTTTTTGAAAAACTGGGTTTACCGGTCATTAAAAAGACGAAAACAGGGTAT TCGACAGACGTTGAGGTCCTGGAAACCCTGGCGGAAAGGCATGAAATTGTGGCCAGGGTGCTTCATTACCGCCAGTTGGT CAAGCTGAAGTCAACCTATGTGGACGGGTTAATTCCTTTGATAAATCCCGTTACGGGAAAGGTCCATACCACCTTTAACC AGACGGTTACGGCAACGGGGCGGTTGAGCAGTACTGAACCAAACCTGCAGAACATACCTATCCGTATGGAAGAAGGCCGC AGGATCAGGAAGGCCTTCGTACCTTCCGAACCAGGCTGGATAATCCTTAGTGCAGATTATTCCCAGATCGAGCTCAGGAT TCTGGCGCACCTTTCCGGGGATGAAAGATTTGTCCAGGCTTTCAGAAATGACGAGGATATTCATACTCGGACTGCCGCGG AAGTATTCGGCGTGTCTTTGGAGGAAGTAACCGGGGAGATGCGCAGCCGGGCCAAGGCTGTTAACTTCGGAATTGTTTAC GGCATCAGTGATTTTGGGCTGGCGAAAAATATCTCTGTAAGCCGAAAAGAAGCCAGGCAGTATATTGAAAACTACTTTGC CCGGTACGCGGGTATAAAAAAATACCTGGAGGAGACAGTCAGGTTGGCCAGGGAACAGGGATATGTAACCACCTTGCTCA ACAGGCGCCGCTACCTGCCCGACATCCTAAGTCCCAACCGGAATATTCGCAGCTTTGGGGAGCGCACTGCCATGAACACT CCAATTCAGGGCAGTGCCGCCGATATAATAAAACTGGCCATGGTCCGGGTTGCCGATTGCCTCAAAAAAGAAGGCTTAAA AGCCCGCATGCTGCTGCAGGTTCACGACGAACTTATTTTTGAGGCGCCGCCTGAAGAACTTCCAAAAGTTACAGGCATTG TAAGGGAATGTATGGAGAACACCGTTAAATTAACGGTTCCATTAAAAGTAGATATGAAAAAGGGGTTCAACTGGTACGAC ATGGAGAAAATTAACGATTAA Protein sequence : MTQGKFIIIDGNSLVYRAFYALPLLKTTTGVYTNAVYGFTTMLMKVLNEEKPACLAIAFDKGKTTFRNEHFEDYKGHRKA TPDELKPQFPLVKEIVRAFRIPVYEIEGYEADDIIGTVSLKAEEMGYETVIVTGDRDALQLVSPKTRVMLTKKGISEMEL YDENKVAERYGLKPAQIIDMKGLMGDTSDNIPGVPGIGEKTAAKLVREYGSVEELLAQRGTVAGKLREKLEQYAEQALLS KKLATIIRHVPIEIDLRECVVEEPDYAKLLELGRSLEFKALTKLAQEKAPEQPEKLSEPVDEAKQLQINGEYRQYNFDEA LASITRFVEQKKDLALVLQTSNQDPWSAGILGLAWSAEPGSGGYLAGEELQPADKLTRILDTVLWTKGWVCFHDAKRTDI LLRRLGNKPVRAGFDTMLAAYLLDPSVSNLDLAALSIKYLGQELSPGEDYRSFCAQADIILRLVPVLHEKLAELNMLDLY FDVEMPLLHILADMEFSGVKLDKEYLEAMSVDLSTEIDRITGDIYRLAGEEFNINSTRQLGTILFEKLGLPVIKKTKTGY STDVEVLETLAERHEIVARVLHYRQLVKLKSTYVDGLIPLINPVTGKVHTTFNQTVTATGRLSSTEPNLQNIPIRMEEGR RIRKAFVPSEPGWIILSADYSQIELRILAHLSGDERFVQAFRNDEDIHTRTAAEVFGVSLEEVTGEMRSRAKAVNFGIVY GISDFGLAKNISVSRKEARQYIENYFARYAGIKKYLEETVRLAREQGYVTTLLNRRRYLPDILSPNRNIRSFGERTAMNT PIQGSAADIIKLAMVRVADCLKKEGLKARMLLQVHDELIFEAPPEELPKVTGIVRECMENTVKLTVPLKVDMKKGFNWYD MEKIND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 4e-170 | 44 |
