Gene Information

Name : TherJR_0817 (TherJR_0817)
Accession : YP_003639585.1
Strain : Thermincola potens JR
Genome accession: NC_014152
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 816017 - 816721 bp
Length : 705 bp
Strand : +
Note : KEGG: nth:Nther_2084 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGGAAATAGTTATTAAAACGAAAAACCTGCATAAAACCTTCTTTAACGGTGAGGTGCCTGTCCATGCCCTCAAGGGAGT
TAACCTGGACATTAACGAGGGAGAGTTTGTGGTTATCCTGGGGCCCAGCGGTTCCGGCAAGAGTACGCTCCTGAATATTC
TTGGTGGGATGGATGCTCCCACCGAAGGAGAGATTTACTATCGGGGTATCCCGCTGCATAATATGGGCAAAAAAGAACTG
ACCATGTTCAGGCGGAATGCTGTAGGCTTTATTTTTCAGTTCTACAACCTGATACCCAATCTGACAGCTTATGAAAATGT
GGCCCTGGCGGCGGAAATAGCCGTTAACCCCTTAGACCCCGCCACAATTCTTGCCGAAATGGGGCTGGCCGACAGAAAAA
ATCATTTTCCGTCCCAGTTATCGGGCGGGCAACAACAGCGTGTTGCTATAGCCCGGGCTATTGCGAAAAACCCGGATATT
TTACTCTGCGACGAACCTACCGGAGCTTTGGACTACGAAACAGGGAAGCAGGTGTTAGATACGTTAAGAAACTTCAATCG
GGTGATGGGCAAGACTGTTTTGGTCATTACCCACAATGCCGCCATAGGAAAAATGGCCGACCGGGTTATATACATCAAGG
ACGGCCGGGTGGATAAGGTAGAGGTTAATGCCAACCCCGTAACTGCCGGCGAGGTGAGCTGGTAA

Protein sequence : 
MEIVIKTKNLHKTFFNGEVPVHALKGVNLDINEGEFVVILGPSGSGKSTLLNILGGMDAPTEGEIYYRGIPLHNMGKKEL
TMFRRNAVGFIFQFYNLIPNLTAYENVALAAEIAVNPLDPATILAEMGLADRKNHFPSQLSGGQQQRVAIARAIAKNPDI
LLCDEPTGALDYETGKQVLDTLRNFNRVMGKTVLVITHNAAIGKMADRVIYIKDGRVDKVEVNANPVTAGEVSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TherJR_0817 YP_003639585.1 ABC transporter NC_012469.1.7685735. Protein 2e-51 55
TherJR_0817 YP_003639585.1 ABC transporter CP001581.1.gene598.p Protein 3e-38 47
TherJR_0817 YP_003639585.1 ABC transporter NC_012469.1.7686878. Protein 8e-36 45
TherJR_0817 YP_003639585.1 ABC transporter CP001581.1.gene798.p Protein 5e-35 44
TherJR_0817 YP_003639585.1 ABC transporter NC_008702.1.4606598. Protein 6e-30 43