Gene Information

Name : TherJR_2972 (TherJR_2972)
Accession : YP_003641702.1
Strain : Thermincola potens JR
Genome accession: NC_014152
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 3114039 - 3115379 bp
Length : 1341 bp
Strand : -
Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: drm:Dred_3301 replicative DNA helicase; SMART: ATPase AAA

DNA sequence :
TTGAGTTTACCACTGGAAAAAATACCTCCACAAAACCTGGACGCTGAGCAATCCGTTCTCGGAGCTATGCTCATCGATAA
GGAATCCATAATCAAGGTAAGCGAAATTTTGCGCCCCGAAGATTTTTACCGGGATGCCCATAAACACATTTATGAAGCCA
TGCTGGACCTCAGTGAACGTAATGAGGCAGTTGACCTGATTACCCTTACTGAGGAGTTGCGGCAGAGGGGGTTTTTGGAC
CAGGTGGGGGGGGCGGCATACGTGGCCGGCTTGGCCACCATGGTGCCCACGGCCGCCAATGTGGAGTATTATGCCCGCAT
AGTTGAGGAAAAGGCCCTGCTTAGGAACCTGATTAATGTTGCTACAAGAATAGTGGCTCTTGGTTACGAAAGTGATGAGG
AACCCACGGAGCTTATAGATACTGCGGAGAAAATGATTTTTGAACTGTCGCAGCGGAAAGCGCGGGAGGGTTTTTCACCA
TTAAAAAATATTCTCATGCAGACTTTTGACCGGATTGAAGACCTGTACAATAACAAGGGCCAAATAACCGGTGTGCCCAG
TGGTTTTGTGGATTTGGACAGGCTGACCTCGGGATTTCAGCCGTCGGATCTGATTATTGTGGCGGCCAGACCTTCTATGG
GAAAGACAGCATTTTGCCTGAATATTGCCCAACATGCCGCTGTACGCAGCCAGGTACCGGTGGCAATTTTCAGCCTGGAA
ATGTCCAAAGAGCAGTTGGTACAGAGAATTCTCTGCAGCCAGGCTATGGTGGACCAGCAGAAAATAAGAACAGGCAACCT
GGAAGAAGAGGACTGGAAAAAACTTACCAAAGCAGCGGGGCCATTATCGCAAGCGCCTATATATATTGATGATACGCCCG
GTTTATCTGTAAGCGAGATGCGCGCCAAGGCCCGCCGGTTGAAAGCGGAAAAAGGGTTGGGGTTAATAGTCATAGATTAC
CTGCAGTTAATGTCTGCAAGCTCAAGAAGAAGTGAAAATAGACAGCAGGAAATTTCCGAGATTTCCCGTTCCCTTAAATT
GCTGGCCAGGGAACTGCAGGCGCCCGTAATTGCTCTTTCCCAGCTCAGCCGGGCCGTGGAGCAAAGGCAGGATAAACGGC
CCATGATGTCGGACTTGCGGGAAAGTGGTTCTCTTGAACAGGATGCGGACCTGGTCATGTTTATTTACAGAGATGATTAT
TACAACCCGGAATCTGAAAAAAAAGGTATTTCCGAATTAATTATTGCCAAGCAGCGGAACGGGCCTGTGGGAACCGTTGA
ACTCGGCTTTCTGAAGGAATTTACAAAGTTTGTTAACCTGGAACGCCATCGTGCTGATTAA

Protein sequence :
MSLPLEKIPPQNLDAEQSVLGAMLIDKESIIKVSEILRPEDFYRDAHKHIYEAMLDLSERNEAVDLITLTEELRQRGFLD
QVGGAAYVAGLATMVPTAANVEYYARIVEEKALLRNLINVATRIVALGYESDEEPTELIDTAEKMIFELSQRKAREGFSP
LKNILMQTFDRIEDLYNNKGQITGVPSGFVDLDRLTSGFQPSDLIIVAARPSMGKTAFCLNIAQHAAVRSQVPVAIFSLE
MSKEQLVQRILCSQAMVDQQKIRTGNLEEEDWKKLTKAAGPLSQAPIYIDDTPGLSVSEMRAKARRLKAEKGLGLIVIDY
LQLMSASSRRSENRQQEISEISRSLKLLARELQAPVIALSQLSRAVEQRQDKRPMMSDLRESGSLEQDADLVMFIYRDDY
YNPESEKKGISELIIAKQRNGPVGTVELGFLKEFTKFVNLERHRAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-79 46
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-83 43
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 8e-73 43
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 8e-73 43
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 7e-75 42
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-75 42
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-76 42
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-62 41