Gene Information

Name : TherJR_1942 (TherJR_1942)
Accession : YP_003640692.1
Strain : Thermincola potens JR
Genome accession: NC_014152
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2017013 - 2017822 bp
Length : 810 bp
Strand : -
Note : KEGG: bbe:BBR47_49620 probable ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence :
ATGACCGTAACGAAAAAGGCCCATGTTTGGATTGGGGTTGGTAAGATGGAGAAGGCAATTGAAGTCATTAACCTGACCAA
AAAATTCGGCTCTTTAACGGCAGTAAATAATATTTCTTTTCAGGTCCAGCGGGGACAGATTTTTGGTTTTCTGGGCGCCA
ACGGCTCCGGTAAATCAACCACTATCCGCATGTTGTGCGGCATTCTTACCCCTTCGTCAGGGGAGGGCCGGGTATTGGGG
TTTGATATTGTGCGGGAAGCGGAACAGATTAAACAGAATATCGGCTATATGTCCCAAAAGTTCAGTCTTTATGAAGACCT
GACCGTAGAAGAAAACATCGCATTTTATGCCGGGATATACGGACTTTCCGGGACCACGGCAGAAAAAAGGAAAAAGGAAA
TTATCGAATTAGCCAACTTGCGCGGTCGGGAAAAACATTTAGCCGGTAATTTGTCAGGGGGATGGAAGCAGAGACTGGCC
CTTGGATGCGCCCTGCTGCATAACCCGTCTCTTTTGTTTCTTGATGAGCCTACAGCCGGTGTAGACCCCGTTTCCCGGCG
GATTTTCTGGGAAATTATCAAGGACCTGGCCGGTAAAGGAATGACCATTCTTGTAACTACCCATTATATGGACGAAGCGG
AGTTATGCGATACTGTTGGATTAATCCATTTTGGCAATCTGGTAGCATTTGGCACGCCTGAAGAACTAAAACAGAAATTT
GGACAAGAAAGCCTGGAAGGTGTGTTTATCTCGTTTGTGGGTAAAGAAGAATTGGAAGCCGTACAGAGAAGGTTCCGGCG
GGAAGGATGA

Protein sequence :
MTVTKKAHVWIGVGKMEKAIEVINLTKKFGSLTAVNNISFQVQRGQIFGFLGANGSGKSTTIRMLCGILTPSSGEGRVLG
FDIVREAEQIKQNIGYMSQKFSLYEDLTVEENIAFYAGIYGLSGTTAEKRKKEIIELANLRGREKHLAGNLSGGWKQRLA
LGCALLHNPSLLFLDEPTAGVDPVSRRIFWEIIKDLAGKGMTILVTTHYMDEAELCDTVGLIHFGNLVAFGTPEELKQKF
GQESLEGVFISFVGKEELEAVQRRFRREG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 5e-40 42
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 9e-38 41